U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    LINC02805 long intergenic non-protein coding RNA 2805 [ Homo sapiens (human) ]

    Gene ID: 100505824, updated on 17-Jun-2024

    Summary

    Official Symbol
    LINC02805provided by HGNC
    Official Full Name
    long intergenic non-protein coding RNA 2805provided by HGNC
    Primary source
    HGNC:HGNC:54339
    See related
    Ensembl:ENSG00000232265 AllianceGenome:HGNC:54339
    Gene type
    ncRNA
    RefSeq status
    VALIDATED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Expression
    Restricted expression toward testis (RPKM 12.6) See more
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    See LINC02805 in Genome Data Viewer
    Location:
    1q21.2
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 1 NC_000001.11 (148162710..148163413)
    RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 1 NC_060925.1 (146644006..146644709, complement)
    105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 1 NC_000001.10 (147634989..147635692)

    Chromosome 1 - NC_000001.11Genomic Context describing neighboring genes Neighboring gene NBPF member 11 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 1637 Neighboring gene ABHD17A pseudogene 1 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 1638 Neighboring gene uncharacterized LOC105371227 Neighboring gene RNA, 5S ribosomal pseudogene 57 Neighboring gene uncharacterized LOC101927468 Neighboring gene NANOG hESC enhancer GRCh37_chr1:147691416-147691917 Neighboring gene NANOG hESC enhancer GRCh37_chr1:147710223-147710724

    Genomic regions, transcripts, and products

    Expression

    • Project title: HPA RNA-seq normal tissues
    • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
    • BioProject: PRJEB4337
    • Publication: PMID 24309898
    • Analysis date: Wed Apr 4 07:08:55 2018

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_135559.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AI917728, BC033999
      Related
      ENST00000411978.1

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000001.11 Reference GRCh38.p14 Primary Assembly

      Range
      148162710..148163413
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060925.1 Alternate T2T-CHM13v2.0

      Range
      146644006..146644709 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)