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    LINC03129 long intergenic non-protein coding RNA 3129 [ Homo sapiens (human) ]

    Gene ID: 84214, updated on 28-Oct-2024

    Summary

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    Official Symbol
    LINC03129provided by HGNC
    Official Full Name
    long intergenic non-protein coding RNA 3129provided by HGNC
    Primary source
    HGNC:HGNC:57044
    See related
    Ensembl:ENSG00000236529 AllianceGenome:HGNC:57044
    Gene type
    ncRNA
    RefSeq status
    MODEL
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Annotation information
    Annotation category: partial on reference assembly
    Expression
    Biased expression in testis (RPKM 4.4), skin (RPKM 0.4) and 2 other tissues See more
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    Genomic context

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    See LINC03129 in Genome Data Viewer
    Location:
    7q11.21
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 7 NC_000007.14 (65839704..65842402)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 7 NC_060931.1 (67061841..67064533)

    Chromosome 7 - NC_000007.14Genomic Context describing neighboring genes Neighboring gene RNA, U6 small nuclear 912, pseudogene Neighboring gene uncharacterized LOC124901659 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr7:65304029-65304540 Neighboring gene RNA, U6 small nuclear 973, pseudogene Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 18200 Neighboring gene H3K27ac hESC enhancer GRCh37_chr7:65337908-65338459 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 18202 Neighboring gene vitamin K epoxide reductase complex subunit 1 like 1 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr7:65339011-65339562 Neighboring gene ReSE screen-validated silencer GRCh37_chr7:65386680-65386862 Neighboring gene heterogeneous nuclear ribonucleoprotein A1 pseudogene 75

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Toward a catalog of human genes and proteins: sequencing and analysis of 500 novel complete protein coding human cDNAs. Wiemann S, et al. Genome Res, 2001 Mar. PMID 11230166, Free PMC Article

    GeneRIFs: Gene References Into Functions

    Phenotypes

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    Review eQTL and phenotype association data in this region using PheGenI

    Variation

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    See variants in ClinVar

    See studies and variants in dbVar

    See Variation Viewer (GRCh38)

    Genotypes

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000007.14 Reference GRCh38.p14 Primary Assembly

      Range
      65839704..65842402
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RNA

    1. XR_002956508.2 RNA Sequence

      Related
      ENST00000447086.2

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060931.1 Alternate T2T-CHM13v2.0

      Range
      67061841..67064533
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RNA

    1. XR_007077597.1 RNA Sequence

    Suppressed Reference Sequence(s)

    The following Reference Sequences have been suppressed. Explain

    1. NM_032254.1: Suppressed sequence

      Description
      NM_032254.1: This RefSeq was suppressed temporarily based on the calculation that the annotated protein was shorter than a protein or proteins from a putative ortholog.
    Nucleotide Protein
    Heading Accession and Version

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