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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001013746.3 → NP_001013768.1 zinc finger protein 107 isoform a
See identical proteins and their annotated locations for NP_001013768.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (2) lacks two alternate exons in the 5' UTR, compared to variant 1. Variants 1 and 2 encode the same isoform (a).
- Source sequence(s)
-
AC091799, BC047243, DA723595
- Consensus CDS
-
CCDS5527.1
- UniProtKB/Swiss-Prot
-
Q9UII5
- Related
- ENSP00000343443.3, ENST00000344930.7
- Conserved Domains (3) summary
-
- COG5048
Location:186 → 655
- COG5048; FOG: Zn-finger [General function prediction only]
- sd00017
Location:414 → 434
- ZF_C2H2; C2H2 Zn finger [structural motif]
- pfam13465
Location:454 → 479
- zf-H2C2_2; Zinc-finger double domain
-
NM_001282359.2 → NP_001269288.1 zinc finger protein 107 isoform b
See identical proteins and their annotated locations for NP_001269288.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (3) lacks three alternate exons and initiates translation at an alternate upstream start codon, compared to variant 1. The encoded isoform (b) has a longer N-terminus, compared to isoform a.
- Source sequence(s)
-
AC091799, DA723595
- Consensus CDS
-
CCDS75605.1
- UniProtKB/TrEMBL
-
A0A0B4J2G0
- Related
- ENSP00000483720.1, ENST00000620827.6
- Conserved Domains (5) summary
-
- smart00349
Location:4 → 64
- KRAB; krueppel associated box
- COG5048
Location:255 → 724
- COG5048; FOG: Zn-finger [General function prediction only]
- sd00017
Location:483 → 503
- ZF_C2H2; C2H2 Zn finger [structural motif]
- pfam01352
Location:4 → 43
- KRAB; KRAB box
- pfam13465
Location:523 → 548
- zf-H2C2_2; Zinc-finger double domain
-
NM_001282360.2 → NP_001269289.1 zinc finger protein 107 isoform c
See identical proteins and their annotated locations for NP_001269289.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (4) lacks four alternate exons and initiates translation at an alternate upstream start codon, compared to variant 1. The encoded isoform (c) is longer and has a distinct N-terminus, compared to isoform a.
- Source sequence(s)
-
AC016769, AC091799
- Consensus CDS
-
CCDS75606.1
- UniProtKB/TrEMBL
-
A0A087WYK5
- Related
- ENSP00000481898.1, ENST00000613690.5
- Conserved Domains (5) summary
-
- smart00349
Location:4 → 43
- KRAB; krueppel associated box
- COG5048
Location:223 → 692
- COG5048; FOG: Zn-finger [General function prediction only]
- sd00017
Location:451 → 471
- ZF_C2H2; C2H2 Zn finger [structural motif]
- pfam01352
Location:4 → 43
- KRAB; KRAB box
- pfam13465
Location:491 → 516
- zf-H2C2_2; Zinc-finger double domain
-
NM_001388025.1 → NP_001374954.1 zinc finger protein 107 isoform d
Status: VALIDATED
- Source sequence(s)
-
AC016769, AC091799
- Conserved Domains (3) summary
-
- smart00349
Location:48 → 108
- KRAB; krueppel associated box
- COG5048
Location:551 → 863
- COG5048; FOG: Zn-finger [General function prediction only]
- sd00017
Location:527 → 547
- ZF_C2H2; C2H2 Zn finger [structural motif]
-
NM_001388026.1 → NP_001374955.1 zinc finger protein 107 isoform e
Status: VALIDATED
- Source sequence(s)
-
AC016769, AC091799
- Conserved Domains (3) summary
-
- smart00349
Location:9 → 69
- KRAB; krueppel associated box
- COG5048
Location:512 → 824
- COG5048; FOG: Zn-finger [General function prediction only]
- sd00017
Location:488 → 508
- ZF_C2H2; C2H2 Zn finger [structural motif]
-
NM_016220.5 → NP_057304.1 zinc finger protein 107 isoform a
See identical proteins and their annotated locations for NP_057304.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (1) represents the longest transcript. Variants 1 and 2 encode the same isoform (a).
- Source sequence(s)
-
AC091799, BC017809, BC047243
- Consensus CDS
-
CCDS5527.1
- UniProtKB/Swiss-Prot
-
Q9UII5
- Related
- ENSP00000400037.1, ENST00000423627.6
- Conserved Domains (3) summary
-
- COG5048
Location:186 → 655
- COG5048; FOG: Zn-finger [General function prediction only]
- sd00017
Location:414 → 434
- ZF_C2H2; C2H2 Zn finger [structural motif]
- pfam13465
Location:454 → 479
- zf-H2C2_2; Zinc-finger double domain
RNA
-
NR_104148.2 RNA Sequence
Status: VALIDATED
- Description
- Transcript Variant: This variant (5) lacks multiple 3' exons and contains an alternate 3' exon, compared to variant 1. This variant is represented as non-coding because it lacks the entire coding region found in variant 1.
- Source sequence(s)
-
AC016769
-
NR_104149.2 RNA Sequence
Status: VALIDATED
- Description
- Transcript Variant: This variant (6) lacks multiple exons and contains an alternate 3' exon, compared to variant 1. This variant is represented as non-coding because it lacks the entire coding region found in variant 1.
- Source sequence(s)
-
AC016769