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    ANXA2P3 annexin A2 pseudogene 3 [ Homo sapiens (human) ]

    Gene ID: 305, updated on 17-Jun-2024

    Summary

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    Official Symbol
    ANXA2P3provided by HGNC
    Official Full Name
    annexin A2 pseudogene 3provided by HGNC
    Primary source
    HGNC:HGNC:540
    See related
    AllianceGenome:HGNC:540
    Gene type
    pseudo
    RefSeq status
    PROVISIONAL
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Also known as
    LIP2; LPC2C; ANX2L3; ANX2P3
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    Genomic context

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    See ANXA2P3 in Genome Data Viewer
    Location:
    10q21.3
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 10 NC_000010.11 (64825528..64826877)
    RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 10 NC_060934.1 (65683446..65684796)
    105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 10 NC_000010.10 (66585285..66586634)

    Chromosome 10 - NC_000010.11Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC124902439 Neighboring gene uncharacterized LOC105378335 Neighboring gene MPRA-validated peak971 silencer Neighboring gene MPRA-validated peak972 silencer Neighboring gene ribosomal protein L17 pseudogene 35 Neighboring gene uncharacterized LOC107984239 Neighboring gene Sharpr-MPRA regulatory region 14987 Neighboring gene MPRA-validated peak974 silencer Neighboring gene MPRA-validated peak975 silencer Neighboring gene H3K27ac hESC enhancer GRCh37_chr10:66569879-66570556 Neighboring gene uncharacterized LOC105378336 Neighboring gene cytochrome P450 family 2 subfamily C member 61, pseudogene Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_14285 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_14356 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_14377 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_14431 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_14444 Neighboring gene MPRA-validated peak978 silencer Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_14489 Neighboring gene uncharacterized LOC102724863 Neighboring gene long intergenic non-protein coding RNA 2671

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Role of the long non‑coding RNA‑Annexin A2 pseudogene 3/Annexin A2 signaling pathway in biliary atresia‑associated hepatic injury. Nuerzhati Y, et al. Int J Mol Med, 2019 Feb. PMID 30569159, Free PMC Article
    2. Characterization of the human lipocortin-2-encoding multigene family: its structure suggests the existence of a short amino acid unit undergoing duplication. Spano F, et al. Gene, 1990 Nov 15. PMID 2174397
    3. Genome-wide association of lipid-lowering response to statins in combined study populations. Barber MJ, et al. PLoS One, 2010 Mar 22. PMID 20339536, Free PMC Article

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. In cells in which ANXA2 and ANXA2P3 were overexpressed, cell apoptosis was reduced and cell cycle arrest in G2 phase. ANXA2P3 and ANXA2 may be considered biomarkers in patients with biliary atresia.
      Title: Role of the long non‑coding RNA‑Annexin A2 pseudogene 3/Annexin A2 signaling pathway in biliary atresia‑associated hepatic injury.
    Submit: New GeneRIF Correction

    Phenotypes

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    Review eQTL and phenotype association data in this region using PheGenI

    EBI GWAS Catalog

    Description
    Genome-wide association of lipid-lowering response to statins in combined study populations.
    EBI GWAS Catalog

    Variation

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    See studies and variants in dbVar

    See Variation Viewer (GRCh37.p13)

    See Variation Viewer (GRCh38)

    Genotypes

    General gene information

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    Other Names

    • annexin II (lipocortin II) pseudogene 3

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_001446.2 RNA Sequence

      Status: PROVISIONAL

      Source sequence(s)
      AC069020

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000010.11 Reference GRCh38.p14 Primary Assembly

      Range
      64825528..64826877
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060934.1 Alternate T2T-CHM13v2.0

      Range
      65683446..65684796
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

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