NEW
Try the new Transcript table
These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
Genomic
-
NG_009217.2Â RefSeqGene
- Range
-
5051..30614
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
NM_001317237.2 → NP_001304166.1  cathepsin B isoform 2
Status: REVIEWED
- Description
- Transcript Variant: This variant (6) differs in the 5' UTR, lacks an exon in its 5' coding region and uses an alternate translation start site compared to variant 1. The encoded isoform (2) has a shorter and distinct N-terminus, and lacks a predicted signal peptide compared to isoform 1.
- Source sequence(s)
-
AA516096, AC069185, AK130184, BX647765, DC386022
- UniProtKB/TrEMBL
-
Q5HYG5
- Related
- ENSP00000504808.1, ENST00000678629.1
- Conserved Domains (1) summary
-
- cd02620
Location:25 → 204
- Peptidase_C1A_CathepsinB; Cathepsin B group; composed of cathepsin B and similar proteins, including tubulointerstitial nephritis antigen (TIN-Ag). Cathepsin B is a lysosomal papain-like cysteine peptidase which is expressed in all tissues and functions primarily as an ...
-
NM_001384714.1 → NP_001371643.1  cathepsin B isoform 1 preproprotein
Status: REVIEWED
- Description
- Transcript Variant: This variant (7) differs in the 5' UTR compared to variant 1. Both variants 1 and 7 encode the same protein.
- Source sequence(s)
-
AC025857, AC069185
- Consensus CDS
-
CCDS5986.1
- UniProtKB/Swiss-Prot
- B3KQR5, B3KRR5, P07858, Q503A6, Q96D87
- UniProtKB/TrEMBL
- A0A024R374, A0A7P0NGZ6, A8K2H4
- Related
- ENSP00000503674.1, ENST00000678145.1
- Conserved Domains (2) summary
-
- cd02620
Location:81 → 328
- Peptidase_C1A_CathepsinB; Cathepsin B group; composed of cathepsin B and similar proteins, including tubulointerstitial nephritis antigen (TIN-Ag). Cathepsin B is a lysosomal papain-like cysteine peptidase which is expressed in all tissues and functions primarily as an ...
- pfam08127
Location:26 → 65
- Propeptide_C1; Peptidase family C1 propeptide
-
NM_001384723.1 → NP_001371652.1  cathepsin B isoform 1 preproprotein
Status: REVIEWED
- Description
- Transcript Variant: This variant (8) differs in the 5' UTR compared to variant 1. Both variants 1 and 8 encode the same protein.
- Source sequence(s)
-
AC025857, AC069185
- Consensus CDS
-
CCDS5986.1
- UniProtKB/Swiss-Prot
- B3KQR5, B3KRR5, P07858, Q503A6, Q96D87
- UniProtKB/TrEMBL
- A0A024R374, A0A7P0NGZ6, A8K2H4
- Related
- ENSP00000503435.1, ENST00000677819.1
- Conserved Domains (2) summary
-
- cd02620
Location:81 → 328
- Peptidase_C1A_CathepsinB; Cathepsin B group; composed of cathepsin B and similar proteins, including tubulointerstitial nephritis antigen (TIN-Ag). Cathepsin B is a lysosomal papain-like cysteine peptidase which is expressed in all tissues and functions primarily as an ...
- pfam08127
Location:26 → 65
- Propeptide_C1; Peptidase family C1 propeptide
-
NM_001384724.1 → NP_001371653.1  cathepsin B isoform 1 preproprotein
Status: REVIEWED
- Description
- Transcript Variant: This variant (9) differs in the 5' UTR compared to variant 1. Both variants 1 and 9 encode the same protein.
- Source sequence(s)
-
AC025857, AC069185
- Consensus CDS
-
CCDS5986.1
- UniProtKB/Swiss-Prot
- B3KQR5, B3KRR5, P07858, Q503A6, Q96D87
- UniProtKB/TrEMBL
- A0A024R374, A0A7P0NGZ6, A8K2H4
- Related
- ENSP00000504797.1, ENST00000677650.1
- Conserved Domains (2) summary
-
- cd02620
Location:81 → 328
- Peptidase_C1A_CathepsinB; Cathepsin B group; composed of cathepsin B and similar proteins, including tubulointerstitial nephritis antigen (TIN-Ag). Cathepsin B is a lysosomal papain-like cysteine peptidase which is expressed in all tissues and functions primarily as an ...
- pfam08127
Location:26 → 65
- Propeptide_C1; Peptidase family C1 propeptide
-
NM_001384725.1 → NP_001371654.1  cathepsin B isoform 1 preproprotein
Status: REVIEWED
- Description
- Transcript Variant: This variant (10) differs in the 5' UTR compared to variant 1. Both variants 1 and 10 encode the same protein.
- Source sequence(s)
-
AC025857, AC069185
- Consensus CDS
-
CCDS5986.1
- UniProtKB/Swiss-Prot
- B3KQR5, B3KRR5, P07858, Q503A6, Q96D87
- UniProtKB/TrEMBL
- A0A024R374, A0A7P0NGZ6, A8K2H4
- Related
- ENSP00000503513.1, ENST00000678357.1
- Conserved Domains (2) summary
-
- cd02620
Location:81 → 328
- Peptidase_C1A_CathepsinB; Cathepsin B group; composed of cathepsin B and similar proteins, including tubulointerstitial nephritis antigen (TIN-Ag). Cathepsin B is a lysosomal papain-like cysteine peptidase which is expressed in all tissues and functions primarily as an ...
- pfam08127
Location:26 → 65
- Propeptide_C1; Peptidase family C1 propeptide
-
NM_001384726.1 → NP_001371655.1  cathepsin B isoform 1 preproprotein
Status: REVIEWED
- Description
- Transcript Variant: This variant (11) differs in the 5' UTR compared to variant 1. Both variants 1 and 11 encode the same protein.
- Source sequence(s)
-
AC025857, AC069185
- Consensus CDS
-
CCDS5986.1
- UniProtKB/Swiss-Prot
- B3KQR5, B3KRR5, P07858, Q503A6, Q96D87
- UniProtKB/TrEMBL
- A0A024R374, A0A7P0NGZ6, A8K2H4
- Related
- ENSP00000434217.1, ENST00000534510.6
- Conserved Domains (2) summary
-
- cd02620
Location:81 → 328
- Peptidase_C1A_CathepsinB; Cathepsin B group; composed of cathepsin B and similar proteins, including tubulointerstitial nephritis antigen (TIN-Ag). Cathepsin B is a lysosomal papain-like cysteine peptidase which is expressed in all tissues and functions primarily as an ...
- pfam08127
Location:26 → 65
- Propeptide_C1; Peptidase family C1 propeptide
-
NM_001384727.1 → NP_001371656.1  cathepsin B isoform 1 preproprotein
Status: REVIEWED
- Description
- Transcript Variant: This variant (12) differs in the 5' UTR compared to variant 1. Both variants 1 and 12 encode the same protein.
- Source sequence(s)
-
AC025857, AC069185
- Consensus CDS
-
CCDS5986.1
- UniProtKB/Swiss-Prot
- B3KQR5, B3KRR5, P07858, Q503A6, Q96D87
- UniProtKB/TrEMBL
- A0A024R374, A0A7P0NGZ6, A8K2H4
- Related
- ENSP00000503174.1, ENST00000677418.1
- Conserved Domains (2) summary
-
- cd02620
Location:81 → 328
- Peptidase_C1A_CathepsinB; Cathepsin B group; composed of cathepsin B and similar proteins, including tubulointerstitial nephritis antigen (TIN-Ag). Cathepsin B is a lysosomal papain-like cysteine peptidase which is expressed in all tissues and functions primarily as an ...
- pfam08127
Location:26 → 65
- Propeptide_C1; Peptidase family C1 propeptide
-
NM_001384728.1 → NP_001371657.1  cathepsin B isoform 1 preproprotein
Status: REVIEWED
- Description
- Transcript Variant: This variant (13) differs in the 5' UTR compared to variant 1. Both variants 1 and 13 encode the same protein.
- Source sequence(s)
-
AC025857, AC069185
- Consensus CDS
-
CCDS5986.1
- UniProtKB/Swiss-Prot
- B3KQR5, B3KRR5, P07858, Q503A6, Q96D87
- UniProtKB/TrEMBL
- A0A024R374, A0A7P0NGZ6, A8K2H4
- Related
- ENSP00000503487.1, ENST00000678929.1
- Conserved Domains (2) summary
-
- cd02620
Location:81 → 328
- Peptidase_C1A_CathepsinB; Cathepsin B group; composed of cathepsin B and similar proteins, including tubulointerstitial nephritis antigen (TIN-Ag). Cathepsin B is a lysosomal papain-like cysteine peptidase which is expressed in all tissues and functions primarily as an ...
- pfam08127
Location:26 → 65
- Propeptide_C1; Peptidase family C1 propeptide
-
NM_001908.5 → NP_001899.1  cathepsin B isoform 1 preproprotein
See identical proteins and their annotated locations for NP_001899.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (1) encodes isoform (1). Variants 1-5, and 7-13 encode the same isoform (1).
- Source sequence(s)
-
AA516096, AC069185, AK130184, DC386022
- Consensus CDS
-
CCDS5986.1
- UniProtKB/Swiss-Prot
- B3KQR5, B3KRR5, P07858, Q503A6, Q96D87
- UniProtKB/TrEMBL
- A0A024R374, A0A7P0NGZ6, A8K2H4
- Related
- ENSP00000345672.5, ENST00000353047.11
- Conserved Domains (2) summary
-
- cd02620
Location:81 → 328
- Peptidase_C1A_CathepsinB; Cathepsin B group; composed of cathepsin B and similar proteins, including tubulointerstitial nephritis antigen (TIN-Ag). Cathepsin B is a lysosomal papain-like cysteine peptidase which is expressed in all tissues and functions primarily as an ...
- pfam08127
Location:26 → 65
- Propeptide_C1; Peptidase family C1 propeptide
-
NM_147780.4 → NP_680090.1  cathepsin B isoform 1 preproprotein
See identical proteins and their annotated locations for NP_680090.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (2) differs in the 5' UTR compared to variant 1. Variants 1-5 encode the same isoform (1).
- Source sequence(s)
-
AA516096, AC069185, AK130184, BG770805, DC386022
- Consensus CDS
-
CCDS5986.1
- UniProtKB/Swiss-Prot
- B3KQR5, B3KRR5, P07858, Q503A6, Q96D87
- UniProtKB/TrEMBL
- A0A024R374, A0A7P0NGZ6, A8K2H4
- Related
- ENSP00000503078.1, ENST00000677544.1
- Conserved Domains (2) summary
-
- cd02620
Location:81 → 328
- Peptidase_C1A_CathepsinB; Cathepsin B group; composed of cathepsin B and similar proteins, including tubulointerstitial nephritis antigen (TIN-Ag). Cathepsin B is a lysosomal papain-like cysteine peptidase which is expressed in all tissues and functions primarily as an ...
- pfam08127
Location:26 → 65
- Propeptide_C1; Peptidase family C1 propeptide
-
NM_147781.4 → NP_680091.1  cathepsin B isoform 1 preproprotein
See identical proteins and their annotated locations for NP_680091.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (3) differs in the 5' UTR compared to variant 1. Variants 1-5 encode the same isoform (1).
- Source sequence(s)
-
AA516096, AC069185, AK130184, AL543654, DC386022
- Consensus CDS
-
CCDS5986.1
- UniProtKB/Swiss-Prot
- B3KQR5, B3KRR5, P07858, Q503A6, Q96D87
- UniProtKB/TrEMBL
- A0A024R374, A0A7P0NGZ6, A8K2H4
- Related
- ENSP00000342070.3, ENST00000345125.8
- Conserved Domains (2) summary
-
- cd02620
Location:81 → 328
- Peptidase_C1A_CathepsinB; Cathepsin B group; composed of cathepsin B and similar proteins, including tubulointerstitial nephritis antigen (TIN-Ag). Cathepsin B is a lysosomal papain-like cysteine peptidase which is expressed in all tissues and functions primarily as an ...
- pfam08127
Location:26 → 65
- Propeptide_C1; Peptidase family C1 propeptide
-
NM_147782.4 → NP_680092.1  cathepsin B isoform 1 preproprotein
See identical proteins and their annotated locations for NP_680092.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (4) differs in the 5' UTR compared to variant 1. Variants 1-5 encode the same isoform (1).
- Source sequence(s)
-
AA516096, AC069185, AK130184, BG770805, DC386022
- Consensus CDS
-
CCDS5986.1
- UniProtKB/Swiss-Prot
- B3KQR5, B3KRR5, P07858, Q503A6, Q96D87
- UniProtKB/TrEMBL
- A0A024R374, A0A7P0NGZ6, A8K2H4
- Related
- ENSP00000503280.1, ENST00000678242.1
- Conserved Domains (2) summary
-
- cd02620
Location:81 → 328
- Peptidase_C1A_CathepsinB; Cathepsin B group; composed of cathepsin B and similar proteins, including tubulointerstitial nephritis antigen (TIN-Ag). Cathepsin B is a lysosomal papain-like cysteine peptidase which is expressed in all tissues and functions primarily as an ...
- pfam08127
Location:26 → 65
- Propeptide_C1; Peptidase family C1 propeptide
-
NM_147783.4 → NP_680093.1  cathepsin B isoform 1 preproprotein
See identical proteins and their annotated locations for NP_680093.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (5) differs in the 5' UTR compared to variant 1. Variants 1-5 encode the same isoform (1).
- Source sequence(s)
-
AA516096, AC069185, AK092070, AK130184
- Consensus CDS
-
CCDS5986.1
- UniProtKB/Swiss-Prot
- B3KQR5, B3KRR5, P07858, Q503A6, Q96D87
- UniProtKB/TrEMBL
- A0A024R374, A0A7P0NGZ6, A8K2H4
- Related
- ENSP00000503858.1, ENST00000679051.1
- Conserved Domains (2) summary
-
- cd02620
Location:81 → 328
- Peptidase_C1A_CathepsinB; Cathepsin B group; composed of cathepsin B and similar proteins, including tubulointerstitial nephritis antigen (TIN-Ag). Cathepsin B is a lysosomal papain-like cysteine peptidase which is expressed in all tissues and functions primarily as an ...
- pfam08127
Location:26 → 65
- Propeptide_C1; Peptidase family C1 propeptide
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCh38.p14 Primary Assembly
Genomic
-
NC_000008.11Â Reference GRCh38.p14 Primary Assembly
- Range
-
11842524..11868087 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
Reference GRCh38.p14 PATCHES
Genomic
-
NW_018654717.1Â Reference GRCh38.p14 PATCHES
- Range
-
1479972..1505569
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
Alternate T2T-CHM13v2.0
Genomic
-
NC_060932.1Â Alternate T2T-CHM13v2.0
- Range
-
7872212..7897789
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)