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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
Genomic
-
NG_012177.2 RefSeqGene
- Range
-
5002..46165
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
NM_001282688.2 → NP_001269617.1 selenocysteine insertion sequence-binding protein 2 isoform 2
Status: REVIEWED
- Description
- Transcript Variant: This variant (2) uses an alternate in-frame acceptor splice site in the 5' coding region compared to variant 1. The encoded isoform (2) is 1 aa shorter than isoform 1.
- Source sequence(s)
-
AF380995, AK302852, AL160054, BG572344, BX000356
- UniProtKB/TrEMBL
-
B4DZC7
- Conserved Domains (1) summary
-
- pfam01248
Location:656 → 756
- Ribosomal_L7Ae; Ribosomal protein L7Ae/L30e/S12e/Gadd45 family
-
NM_001282689.2 → NP_001269618.1 selenocysteine insertion sequence-binding protein 2 isoform 3
See identical proteins and their annotated locations for NP_001269618.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (3) uses an alternate in-frame acceptor splice site in the 5' coding region, which results in translation initiation from an alternate start codon compared to variant 1. The encoded isoform (3) is shorter, with a distinct N-terminus compared to isoform 1.
- Source sequence(s)
-
AK290182, AL929575, BG572344, BP219148
- Consensus CDS
-
CCDS65076.1
- UniProtKB/TrEMBL
-
B4DR97
- Related
- ENSP00000364959.3, ENST00000339901.8
- Conserved Domains (1) summary
-
- pfam01248
Location:584 → 684
- Ribosomal_L7Ae; Ribosomal protein L7Ae/L30e/S12e/Gadd45 family
-
NM_001282690.1 → NP_001269619.1 selenocysteine insertion sequence-binding protein 2 isoform 4
See identical proteins and their annotated locations for NP_001269619.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (4) contains an alternate 5' terminal exon, which results in translation initiation from an in-frame downstream start codon compared to variant 1. The encoded isoform (4) has a shorter N-terminus compared to isoform 1
- Source sequence(s)
-
AK299161, AL160054, AL929575, BG572344, BX000356
- Consensus CDS
-
CCDS65077.1
- UniProtKB/TrEMBL
-
B4DR97
- Related
- ENSP00000436650.2, ENST00000534113.6
- Conserved Domains (1) summary
-
- pfam01248
Location:589 → 689
- Ribosomal_L7Ae; Ribosomal protein L7Ae/L30e/S12e/Gadd45 family
-
NM_001354696.2 → NP_001341625.1 selenocysteine insertion sequence-binding protein 2 isoform 5
Status: REVIEWED
- Description
- Transcript Variant: This variant (5) uses an alternate in-frame acceptor splice site in the mid-coding region compared to variant 1. The encoded shorter isoform (5) lacks an internal protein segment compared to isoform 1.
- Source sequence(s)
-
BC068466, BC099900, BG572344, BP219148
- UniProtKB/TrEMBL
-
Q59H19
- Conserved Domains (1) summary
-
- pfam01248
Location:618 → 718
- Ribosomal_L7Ae; Ribosomal protein L7Ae/L30e/S12e/Gadd45 family
-
NM_001354697.2 → NP_001341626.1 selenocysteine insertion sequence-binding protein 2 isoform 6
Status: REVIEWED
- Description
- Transcript Variant: This variant (6) uses an alternate in-frame acceptor splice site in the mid-coding region compared to variant 1. The encoded shorter isoform (6) lacks an internal protein segment compared to isoform 1.
- Source sequence(s)
-
BC068466, BG572344, BP219148, KX533480
- UniProtKB/TrEMBL
-
Q59H19
- Conserved Domains (1) summary
-
- pfam01248
Location:619 → 719
- Ribosomal_L7Ae; Ribosomal protein L7Ae/L30e/S12e/Gadd45 family
-
NM_001354698.2 → NP_001341627.1 selenocysteine insertion sequence-binding protein 2 isoform 7
Status: REVIEWED
- Description
- Transcript Variant: This variant (7) uses an alternate in-frame acceptor splice site and lacks an in-frame exon in the mid-coding region compared to variant 1. The encoded shorter isoform (7) lacks two internal protein segments compared to isoform 1.
- Source sequence(s)
-
BC099900, BG572344, BP219148, KX533480
- UniProtKB/TrEMBL
-
Q59H19
- Conserved Domains (1) summary
-
- pfam01248
Location:588 → 688
- Ribosomal_L7Ae; Ribosomal protein L7Ae/L30e/S12e/Gadd45 family
-
NM_001354702.2 → NP_001341631.1 selenocysteine insertion sequence-binding protein 2 isoform 8
Status: REVIEWED
- Description
- Transcript Variant: This variant (8) uses an alternate acceptor splice site in the mid-coding region and initiates translation from an alternate start codon compared to variant 1. The encoded isoform (8) is shorter, with a distinct N-terminus compared to isoform 1.
- Source sequence(s)
-
AI127999, BC068466, BG572344, BP219148
- Conserved Domains (1) summary
-
- pfam01248
Location:362 → 462
- Ribosomal_L7Ae; Ribosomal protein L7Ae/L30e/S12e/Gadd45 family
-
NM_024077.5 → NP_076982.3 selenocysteine insertion sequence-binding protein 2 isoform 1
See identical proteins and their annotated locations for NP_076982.3
Status: REVIEWED
- Description
- Transcript Variant: This variant (1) represents the predominant transcript, and encodes the longest isoform (1).
- Source sequence(s)
-
BC068466, BG572344, BP219148
- Consensus CDS
-
CCDS6683.1
- UniProtKB/Swiss-Prot
- F8W892, Q5HYY1, Q7L1Z0, Q8IYC0, Q96T21, Q9H0A1
- UniProtKB/TrEMBL
-
B4DZC7
- Related
- ENSP00000364965.3, ENST00000375807.8
- Conserved Domains (1) summary
-
- pfam01248
Location:657 → 757
- Ribosomal_L7Ae; Ribosomal protein L7Ae/L30e/S12e/Gadd45 family
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCh38.p14 Primary Assembly
Genomic
-
NC_000009.12 Reference GRCh38.p14 Primary Assembly
- Range
-
89318500..89367117
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_047423856.1 → XP_047279812.1 selenocysteine insertion sequence-binding protein 2 isoform X5
- UniProtKB/Swiss-Prot
- F8W892, Q5HYY1, Q7L1Z0, Q8IYC0, Q96T21, Q9H0A1
-
XM_047423857.1 → XP_047279813.1 selenocysteine insertion sequence-binding protein 2 isoform X5
- UniProtKB/Swiss-Prot
- F8W892, Q5HYY1, Q7L1Z0, Q8IYC0, Q96T21, Q9H0A1
-
XM_047423859.1 → XP_047279815.1 selenocysteine insertion sequence-binding protein 2 isoform X8
-
XM_017015122.3 → XP_016870611.1 selenocysteine insertion sequence-binding protein 2 isoform X7
- UniProtKB/TrEMBL
-
B4DZC7
-
XM_024447666.2 → XP_024303434.1 selenocysteine insertion sequence-binding protein 2 isoform X9
- UniProtKB/TrEMBL
- A0A1S5UZH3, Q59H19
- Conserved Domains (1) summary
-
- pfam01248
Location:589 → 689
- Ribosomal_L7Ae; Ribosomal protein L7Ae/L30e/S12e/Gadd45 family
-
XM_047423854.1 → XP_047279810.1 selenocysteine insertion sequence-binding protein 2 isoform X1
-
XM_011519000.3 → XP_011517302.1 selenocysteine insertion sequence-binding protein 2 isoform X1
See identical proteins and their annotated locations for XP_011517302.1
- UniProtKB/TrEMBL
-
B4DR97
- Conserved Domains (1) summary
-
- pfam01248
Location:589 → 689
- Ribosomal_L7Ae; Ribosomal protein L7Ae/L30e/S12e/Gadd45 family
-
XM_047423855.1 → XP_047279811.1 selenocysteine insertion sequence-binding protein 2 isoform X3
-
XM_011519001.2 → XP_011517303.1 selenocysteine insertion sequence-binding protein 2 isoform X2
- UniProtKB/TrEMBL
-
B4DR97
- Conserved Domains (1) summary
-
- pfam01248
Location:559 → 659
- Ribosomal_L7Ae; Ribosomal protein L7Ae/L30e/S12e/Gadd45 family
-
XM_011519002.2 → XP_011517304.1 selenocysteine insertion sequence-binding protein 2 isoform X3
- UniProtKB/TrEMBL
-
B4DR97
- Conserved Domains (1) summary
-
- pfam01248
Location:551 → 651
- Ribosomal_L7Ae; Ribosomal protein L7Ae/L30e/S12e/Gadd45 family
-
XM_047423858.1 → XP_047279814.1 selenocysteine insertion sequence-binding protein 2 isoform X6
-
XM_011519003.2 → XP_011517305.1 selenocysteine insertion sequence-binding protein 2 isoform X4
- UniProtKB/TrEMBL
-
B4DR97
- Conserved Domains (1) summary
-
- pfam01248
Location:550 → 650
- Ribosomal_L7Ae; Ribosomal protein L7Ae/L30e/S12e/Gadd45 family
-
XM_047423860.1 → XP_047279816.1 selenocysteine insertion sequence-binding protein 2 isoform X10
-
XM_024447667.2 → XP_024303435.1 selenocysteine insertion sequence-binding protein 2 isoform X11
- UniProtKB/TrEMBL
-
B4DR97
- Conserved Domains (1) summary
-
- pfam01248
Location:545 → 645
- Ribosomal_L7Ae; Ribosomal protein L7Ae/L30e/S12e/Gadd45 family
-
XM_047423861.1 → XP_047279817.1 selenocysteine insertion sequence-binding protein 2 isoform X12
-
XM_047423862.1 → XP_047279818.1 selenocysteine insertion sequence-binding protein 2 isoform X13
-
XM_047423863.1 → XP_047279819.1 selenocysteine insertion sequence-binding protein 2 isoform X14
- UniProtKB/TrEMBL
-
Q9H948
RNA
-
XR_007061351.1 RNA Sequence
-
XR_007061350.1 RNA Sequence
-
XR_007061352.1 RNA Sequence
-
XR_007061353.1 RNA Sequence
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XR_007061354.1 RNA Sequence
-
XR_007061347.1 RNA Sequence
-
XR_929840.2 RNA Sequence
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XR_007061346.1 RNA Sequence
-
XR_007061345.1 RNA Sequence
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XR_007061348.1 RNA Sequence
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XR_007061349.1 RNA Sequence
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XR_007061355.1 RNA Sequence
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XR_007061356.1 RNA Sequence
Alternate T2T-CHM13v2.0
Genomic
-
NC_060933.1 Alternate T2T-CHM13v2.0
- Range
-
101482274..101530894
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_054363775.1 → XP_054219750.1 selenocysteine insertion sequence-binding protein 2 isoform X5
- UniProtKB/Swiss-Prot
- F8W892, Q5HYY1, Q7L1Z0, Q8IYC0, Q96T21, Q9H0A1
-
XM_054363776.1 → XP_054219751.1 selenocysteine insertion sequence-binding protein 2 isoform X5
- UniProtKB/Swiss-Prot
- F8W892, Q5HYY1, Q7L1Z0, Q8IYC0, Q96T21, Q9H0A1
-
XM_054363779.1 → XP_054219754.1 selenocysteine insertion sequence-binding protein 2 isoform X8
-
XM_054363778.1 → XP_054219753.1 selenocysteine insertion sequence-binding protein 2 isoform X7
-
XM_054363780.1 → XP_054219755.1 selenocysteine insertion sequence-binding protein 2 isoform X9
- UniProtKB/TrEMBL
-
A0A1S5UZH3
-
XM_054363770.1 → XP_054219745.1 selenocysteine insertion sequence-binding protein 2 isoform X1
-
XM_054363769.1 → XP_054219744.1 selenocysteine insertion sequence-binding protein 2 isoform X1
-
XM_054363773.1 → XP_054219748.1 selenocysteine insertion sequence-binding protein 2 isoform X3
-
XM_054363771.1 → XP_054219746.1 selenocysteine insertion sequence-binding protein 2 isoform X2
-
XM_054363772.1 → XP_054219747.1 selenocysteine insertion sequence-binding protein 2 isoform X3
-
XM_054363777.1 → XP_054219752.1 selenocysteine insertion sequence-binding protein 2 isoform X6
-
XM_054363774.1 → XP_054219749.1 selenocysteine insertion sequence-binding protein 2 isoform X4
-
XM_054363781.1 → XP_054219756.1 selenocysteine insertion sequence-binding protein 2 isoform X10
-
XM_054363782.1 → XP_054219757.1 selenocysteine insertion sequence-binding protein 2 isoform X11
-
XM_054363783.1 → XP_054219758.1 selenocysteine insertion sequence-binding protein 2 isoform X12
-
XM_054363784.1 → XP_054219759.1 selenocysteine insertion sequence-binding protein 2 isoform X13
-
XM_054363785.1 → XP_054219760.1 selenocysteine insertion sequence-binding protein 2 isoform X14
- UniProtKB/TrEMBL
-
Q9H948
RNA
-
XR_008488072.1 RNA Sequence
-
XR_008488071.1 RNA Sequence
-
XR_008488073.1 RNA Sequence
-
XR_008488074.1 RNA Sequence
-
XR_008488075.1 RNA Sequence
-
XR_008488068.1 RNA Sequence
-
XR_008488065.1 RNA Sequence
-
XR_008488067.1 RNA Sequence
-
XR_008488066.1 RNA Sequence
-
XR_008488069.1 RNA Sequence
-
XR_008488070.1 RNA Sequence
-
XR_008488076.1 RNA Sequence
-
XR_008488077.1 RNA Sequence