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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
Genomic
-
NG_028079.2 RefSeqGene
- Range
-
5001..87029
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
NM_001167965.1 → NP_001161437.1 cilia- and flagella-associated protein 57 isoform b
See identical proteins and their annotated locations for NP_001161437.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (3) differs in both UTRs and lacks several exons in the 3' coding region, but includes an alternate 3' exon, compared to variant 5. The resulting isoform (b, also known as WDR65b) has a shorter and distinct C-terminus, compared to isoform a. Both variants 1 and 3 encode isoform b.
- Source sequence(s)
-
AC093420, AK056562, BC117306, DB057663
- Consensus CDS
-
CCDS479.1
- UniProtKB/Swiss-Prot
-
Q96MR6
- Conserved Domains (2) summary
-
- sd00039
Location:341 → 387
- 7WD40; WD40 repeat [structural motif]
- cl25539
Location:341 → 619
- WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
-
NM_001195831.3 → NP_001182760.2 cilia- and flagella-associated protein 57 isoform a
Status: REVIEWED
- Description
- Transcript Variant: This variant (5) represents the longest transcript and encodes the longer isoform (a, also known as WDR65a). This variant is supported by data in PMID:21574244.
- Source sequence(s)
-
AC093420, AK056562, BU609144, CD691772, DB057663, DV080053, DV080109, DV080557
- Consensus CDS
-
CCDS72768.1
- UniProtKB/TrEMBL
-
A0A087WVY5
- Related
- ENSP00000479773.1, ENST00000610710.4
- Conserved Domains (6) summary
-
- COG2319
Location:335 → 670
- WD40; WD40 repeat [General function prediction only]
- pfam09728
Location:728 → 1000
- Taxilin; Myosin-like coiled-coil protein
- sd00039
Location:341 → 387
- 7WD40; WD40 repeat [structural motif]
- cl02567
Location:388 → 666
- WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
- cl23720
Location:887 → 973
- RILP-like; Rab interacting lysosomal protein-like 1 and 2 (Rilpl1 and Rilpl2)
- cl23765
Location:792 → 909
- iSH2_PI3K_IA_R; Inter-Src homology 2 (iSH2) helical domain of Class IA Phosphoinositide 3-kinase Regulatory subunits
-
NM_001378189.1 → NP_001365118.1 cilia- and flagella-associated protein 57 isoform c
Status: REVIEWED
- Source sequence(s)
-
AC093420, AL139138
- Consensus CDS
-
CCDS90934.1
- UniProtKB/Swiss-Prot
- A6NKQ3, Q17RI9, Q5TAI0, Q96MR6
- Related
- ENSP00000361570.4, ENST00000372492.9
- Conserved Domains (4) summary
-
- COG2319
Location:29 → 256
- WD40; WD40 repeat [General function prediction only]
- TIGR04523
Location:703 → 1221
- Mplasa_alph_rch; helix-rich Mycoplasma protein
- sd00039
Location:341 → 387
- 7WD40; WD40 repeat [structural motif]
- cl29593
Location:388 → 666
- WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
-
NM_152498.3 → NP_689711.2 cilia- and flagella-associated protein 57 isoform b
See identical proteins and their annotated locations for NP_689711.2
Status: REVIEWED
- Description
- Transcript Variant: This variant (1) differs in the 3' UTR and lacks several exons in the 3' coding region, but includes an alternate 3' exon, compared to variant 5. The resulting isoform (b, also known as WDR65b) has a shorter and distinct C-terminus, compared to isoform a. Both variants 1 and 3 encode isoform b.
- Source sequence(s)
-
AC093420, AK056562, DB057663
- Consensus CDS
-
CCDS479.1
- UniProtKB/Swiss-Prot
-
Q96MR6
- Related
- ENSP00000435310.1, ENST00000528956.5
- Conserved Domains (2) summary
-
- sd00039
Location:341 → 387
- 7WD40; WD40 repeat [structural motif]
- cl25539
Location:341 → 619
- WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCh38.p14 Primary Assembly
Genomic
-
NC_000001.11 Reference GRCh38.p14 Primary Assembly
- Range
-
43172330..43254358
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_011540796.2 → XP_011539098.1 cilia- and flagella-associated protein 57 isoform X2
See identical proteins and their annotated locations for XP_011539098.1
- Conserved Domains (6) summary
-
- COG2319
Location:324 → 659
- WD40; WD40 repeat [General function prediction only]
- pfam09728
Location:717 → 989
- Taxilin; Myosin-like coiled-coil protein
- pfam16046
Location:919 → 1014
- FAM76; FAM76 protein
- sd00039
Location:330 → 376
- 7WD40; WD40 repeat [structural motif]
- cl02567
Location:377 → 655
- WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
- cl23765
Location:781 → 898
- iSH2_PI3K_IA_R; Inter-Src homology 2 (iSH2) helical domain of Class IA Phosphoinositide 3-kinase Regulatory subunits
-
XM_011540793.1 → XP_011539095.1 cilia- and flagella-associated protein 57 isoform X1
See identical proteins and their annotated locations for XP_011539095.1
- UniProtKB/Swiss-Prot
- A6NKQ3, Q17RI9, Q5TAI0, Q96MR6
- Conserved Domains (4) summary
-
- COG2319
Location:29 → 256
- WD40; WD40 repeat [General function prediction only]
- TIGR04523
Location:703 → 1221
- Mplasa_alph_rch; helix-rich Mycoplasma protein
- sd00039
Location:341 → 387
- 7WD40; WD40 repeat [structural motif]
- cl29593
Location:388 → 666
- WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
-
XM_047447334.1 → XP_047303290.1 cilia- and flagella-associated protein 57 isoform X4
-
XM_006710383.2 → XP_006710446.1 cilia- and flagella-associated protein 57 isoform X2
See identical proteins and their annotated locations for XP_006710446.1
- Conserved Domains (6) summary
-
- COG2319
Location:324 → 659
- WD40; WD40 repeat [General function prediction only]
- pfam09728
Location:717 → 989
- Taxilin; Myosin-like coiled-coil protein
- pfam16046
Location:919 → 1014
- FAM76; FAM76 protein
- sd00039
Location:330 → 376
- 7WD40; WD40 repeat [structural motif]
- cl02567
Location:377 → 655
- WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
- cl23765
Location:781 → 898
- iSH2_PI3K_IA_R; Inter-Src homology 2 (iSH2) helical domain of Class IA Phosphoinositide 3-kinase Regulatory subunits
-
XM_017000422.3 → XP_016855911.1 cilia- and flagella-associated protein 57 isoform X9
- UniProtKB/TrEMBL
-
A0A087WVY5
- Conserved Domains (6) summary
-
- COG2319
Location:335 → 670
- WD40; WD40 repeat [General function prediction only]
- pfam09728
Location:728 → 1000
- Taxilin; Myosin-like coiled-coil protein
- sd00039
Location:341 → 387
- 7WD40; WD40 repeat [structural motif]
- cl02567
Location:388 → 666
- WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
- cl23720
Location:887 → 973
- RILP-like; Rab interacting lysosomal protein-like 1 and 2 (Rilpl1 and Rilpl2)
- cl23765
Location:792 → 909
- iSH2_PI3K_IA_R; Inter-Src homology 2 (iSH2) helical domain of Class IA Phosphoinositide 3-kinase Regulatory subunits
-
XM_011540798.2 → XP_011539100.1 cilia- and flagella-associated protein 57 isoform X5
- Conserved Domains (6) summary
-
- COG2319
Location:335 → 596
- WD40; WD40 repeat [General function prediction only]
- pfam09728
Location:657 → 929
- Taxilin; Myosin-like coiled-coil protein
- pfam16046
Location:859 → 954
- FAM76; FAM76 protein
- sd00039
Location:341 → 387
- 7WD40; WD40 repeat [structural motif]
- cl02567
Location:341 → 607
- WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
- cl23765
Location:721 → 838
- iSH2_PI3K_IA_R; Inter-Src homology 2 (iSH2) helical domain of Class IA Phosphoinositide 3-kinase Regulatory subunits
-
XM_011540799.2 → XP_011539101.1 cilia- and flagella-associated protein 57 isoform X6
- Conserved Domains (6) summary
-
- COG2319
Location:304 → 538
- WD40; WD40 repeat [General function prediction only]
- pfam09728
Location:599 → 871
- Taxilin; Myosin-like coiled-coil protein
- pfam16046
Location:801 → 896
- FAM76; FAM76 protein
- sd00039
Location:341 → 387
- 7WD40; WD40 repeat [structural motif]
- cl02567
Location:338 → 537
- WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
- cl23765
Location:663 → 780
- iSH2_PI3K_IA_R; Inter-Src homology 2 (iSH2) helical domain of Class IA Phosphoinositide 3-kinase Regulatory subunits
-
XM_047447331.1 → XP_047303287.1 cilia- and flagella-associated protein 57 isoform X2
-
XM_011540795.4 → XP_011539097.1 cilia- and flagella-associated protein 57 isoform X1
See identical proteins and their annotated locations for XP_011539097.1
- UniProtKB/Swiss-Prot
- A6NKQ3, Q17RI9, Q5TAI0, Q96MR6
- Conserved Domains (4) summary
-
- COG2319
Location:29 → 256
- WD40; WD40 repeat [General function prediction only]
- TIGR04523
Location:703 → 1221
- Mplasa_alph_rch; helix-rich Mycoplasma protein
- sd00039
Location:341 → 387
- 7WD40; WD40 repeat [structural motif]
- cl29593
Location:388 → 666
- WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
-
XM_011540794.2 → XP_011539096.1 cilia- and flagella-associated protein 57 isoform X1
See identical proteins and their annotated locations for XP_011539096.1
- UniProtKB/Swiss-Prot
- A6NKQ3, Q17RI9, Q5TAI0, Q96MR6
- Conserved Domains (4) summary
-
- COG2319
Location:29 → 256
- WD40; WD40 repeat [General function prediction only]
- TIGR04523
Location:703 → 1221
- Mplasa_alph_rch; helix-rich Mycoplasma protein
- sd00039
Location:341 → 387
- 7WD40; WD40 repeat [structural motif]
- cl29593
Location:388 → 666
- WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
-
XM_011540800.3 → XP_011539102.1 cilia- and flagella-associated protein 57 isoform X7
- Conserved Domains (6) summary
-
- COG2319
Location:335 → 670
- WD40; WD40 repeat [General function prediction only]
- pfam09728
Location:728 → 1000
- Taxilin; Myosin-like coiled-coil protein
- pfam16046
Location:930 → 1025
- FAM76; FAM76 protein
- sd00039
Location:341 → 387
- 7WD40; WD40 repeat [structural motif]
- cl02567
Location:388 → 666
- WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
- cl23765
Location:792 → 909
- iSH2_PI3K_IA_R; Inter-Src homology 2 (iSH2) helical domain of Class IA Phosphoinositide 3-kinase Regulatory subunits
-
XM_047447336.1 → XP_047303292.1 cilia- and flagella-associated protein 57 isoform X8
-
XM_011540797.3 → XP_011539099.1 cilia- and flagella-associated protein 57 isoform X3
- Conserved Domains (6) summary
-
- COG2319
Location:314 → 649
- WD40; WD40 repeat [General function prediction only]
- pfam09728
Location:707 → 979
- Taxilin; Myosin-like coiled-coil protein
- pfam16046
Location:909 → 1004
- FAM76; FAM76 protein
- sd00039
Location:320 → 366
- 7WD40; WD40 repeat [structural motif]
- cl02567
Location:367 → 645
- WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
- cl15774
Location:741 → 867
- Hemerythrin-like; Hemerythrin family
Alternate T2T-CHM13v2.0
Genomic
-
NC_060925.1 Alternate T2T-CHM13v2.0
- Range
-
43042826..43124856
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_054334649.1 → XP_054190624.1 cilia- and flagella-associated protein 57 isoform X2
-
XM_054334647.1 → XP_054190622.1 cilia- and flagella-associated protein 57 isoform X1
-
XM_054334651.1 → XP_054190626.1 cilia- and flagella-associated protein 57 isoform X4
-
XM_054334648.1 → XP_054190623.1 cilia- and flagella-associated protein 57 isoform X2
-
XM_054334658.1 → XP_054190633.1 cilia- and flagella-associated protein 57 isoform X9
-
XM_054334652.1 → XP_054190627.1 cilia- and flagella-associated protein 57 isoform X5
-
XM_054334653.1 → XP_054190628.1 cilia- and flagella-associated protein 57 isoform X6
-
XM_054334654.1 → XP_054190629.1 cilia- and flagella-associated protein 57 isoform X7
-
XM_054334655.1 → XP_054190630.1 cilia- and flagella-associated protein 57 isoform X8
-
XM_054334657.1 → XP_054190632.1 cilia- and flagella-associated protein 57 isoform X11
-
XM_054334656.1 → XP_054190631.1 cilia- and flagella-associated protein 57 isoform X10
-
XM_054334650.1 → XP_054190625.1 cilia- and flagella-associated protein 57 isoform X3
The following Reference Sequences have been suppressed. Explain
These RefSeqs were suppressed for the
cited reason(s). Suppressed RefSeqs do not appear in BLAST databases, related
sequence links, or BLAST links (BLink), but may still be retrieved by clicking on
their accession.version below.
-
NM_001167966.1: Suppressed sequence
- Description
- NM_001167966.1: This RefSeq was permanently suppressed because currently there is insufficient support for the transcript.
-
NR_030778.1: Suppressed sequence
- Description
- NR_030778.1: This RefSeq was permanently suppressed because currently there is insufficient support for the transcript.