U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    Tas1r3 taste 1 receptor member 3 [ Rattus norvegicus (Norway rat) ]

    Gene ID: 170634, updated on 2-Nov-2024

    Summary

    Official Symbol
    Tas1r3provided by RGD
    Official Full Name
    taste 1 receptor member 3provided by RGD
    Primary source
    RGD:620539
    See related
    EnsemblRapid:ENSRNOG00000019589 AllianceGenome:RGD:620539
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Rattus norvegicus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
    Also known as
    T1r3
    Summary
    Enables taste receptor activity. Involved in sensory perception of sweet taste and sensory perception of umami taste. Predicted to be located in Golgi apparatus. Predicted to be part of sweet taste receptor complex. Predicted to be active in plasma membrane. Orthologous to human TAS1R3 (taste 1 receptor member 3). [provided by Alliance of Genome Resources, Nov 2024]
    Expression
    Biased expression in Muscle (RPKM 66.1), Liver (RPKM 53.4) and 9 other tissues See more
    Orthologs
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    See Tas1r3 in Genome Data Viewer
    Location:
    5q36
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCr8 (GCF_036323735.1) 5 NC_086023.1 (171750937..171754993, complement)
    RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 5 NC_051340.1 (166468703..166472759, complement)
    106 previous assembly Rnor_6.0 (GCF_000001895.5) 5 NC_005104.4 (173307325..173312950, complement)

    Chromosome 5 - NC_086023.1Genomic Context describing neighboring genes Neighboring gene aurora kinase A interacting protein 1 Neighboring gene matrix remodeling associated 8 Neighboring gene dishevelled segment polarity protein 1 Neighboring gene ceramide-1-phosphate transfer protein Neighboring gene integrator complex subunit 11 Neighboring gene pseudouridine synthase like 1

    Genomic regions, transcripts, and products

    Expression

    • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
    • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
    • BioProject: PRJNA238328
    • Publication: PMID 24510058
    • Analysis date: Mon Jun 6 17:44:12 2016

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Pathways from PubChem

    General gene information

    Gene Ontology Provided by RGD

    Function Evidence Code Pubs
    enables G protein-coupled receptor activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    contributes_to sweet taste receptor activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    contributes_to sweet taste receptor activity ISO
    Inferred from Sequence Orthology
    more info
     
    enables taste receptor activity IDA
    Inferred from Direct Assay
    more info
    PubMed 
    enables taste receptor activity IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    contributes_to taste receptor activity ISO
    Inferred from Sequence Orthology
    more info
     
    enables taste receptor activity ISO
    Inferred from Sequence Orthology
    more info
     
    Component Evidence Code Pubs
    located_in Golgi apparatus IEA
    Inferred from Electronic Annotation
    more info
     
    located_in Golgi apparatus ISO
    Inferred from Sequence Orthology
    more info
     
    located_in membrane IC
    Inferred by Curator
    more info
    PubMed 
    is_active_in plasma membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in plasma membrane ISO
    Inferred from Sequence Orthology
    more info
     
    part_of sweet taste receptor complex ISO
    Inferred from Sequence Orthology
    more info
     

    General protein information

    Preferred Names
    taste receptor type 1 member 3
    Names
    sweet taste receptor T1R3
    taste receptor, type 1, member 3

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_130818.2NP_570831.1  taste receptor type 1 member 3 precursor

      See identical proteins and their annotated locations for NP_570831.1

      Status: VALIDATED

      Source sequence(s)
      JAXUCZ010000005
      UniProtKB/Swiss-Prot
      Q923K1
      UniProtKB/TrEMBL
      A6IUT6
      Related
      ENSRNOP00000026671.1, ENSRNOT00000026671.4
      Conserved Domains (4) summary
      pfam00003
      Location:595821
      7tm_3; 7 transmembrane sweet-taste receptor of 3 GCPR
      pfam01094
      Location:73469
      ANF_receptor; Receptor family ligand binding region
      pfam07562
      Location:501551
      NCD3G; Nine Cysteines Domain of family 3 GPCR
      cl10011
      Location:29494
      Periplasmic_Binding_Protein_Type_1; Type 1 periplasmic binding fold superfamily

    RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCr8

    Genomic

    1. NC_086023.1 Reference GRCr8

      Range
      171750937..171754993 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)