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    Mospd4 motile sperm domain containing 4 [ Rattus norvegicus (Norway rat) ]

    Gene ID: 317161, updated on 28-Oct-2024

    Summary

    Official Symbol
    Mospd4provided by RGD
    Official Full Name
    motile sperm domain containing 4provided by RGD
    Primary source
    RGD:1304785
    See related
    EnsemblRapid:ENSRNOG00000003575 AllianceGenome:RGD:1304785
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Rattus norvegicus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
    Summary
    Predicted to enable protein-membrane adaptor activity. Predicted to be involved in neuron projection development. Predicted to be located in bicellular tight junction. Predicted to be active in endoplasmic reticulum membrane and plasma membrane. Orthologous to human VAPA (VAMP associated protein A). [provided by Alliance of Genome Resources, Oct 2024]
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    Genomic context

    See Mospd4 in Genome Data Viewer
    Location:
    18q11
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCr8 (GCF_036323735.1) 18 NC_086036.1 (41377129..41377946, complement)
    RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 18 NC_051353.1 (39190515..39191332, complement)
    106 previous assembly Rnor_6.0 (GCF_000001895.5) 18 NC_005117.4 (40451639..40452456, complement)

    Chromosome 18 - NC_086036.1Genomic Context describing neighboring genes Neighboring gene protein geranylgeranyltransferase type I subunit beta Neighboring gene uncharacterized LOC134483014 Neighboring gene coiled-coil domain containing 112 Neighboring gene U6 spliceosomal RNA Neighboring gene ribosomal protein S9, pseudogene 7

    Genomic regions, transcripts, and products

    General gene information

    Markers

    Gene Ontology Provided by RGD

    Function Evidence Code Pubs
    enables protein-membrane adaptor activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    Process Evidence Code Pubs
    involved_in neuron projection development IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    Component Evidence Code Pubs
    located_in bicellular tight junction IEA
    Inferred from Electronic Annotation
    more info
     
    is_active_in endoplasmic reticulum membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    is_active_in plasma membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
     

    General protein information

    Preferred Names
    motile sperm domain containing 4

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001108241.1NP_001101711.1  motile sperm domain containing 4

      See identical proteins and their annotated locations for NP_001101711.1

      Status: PROVISIONAL

      Source sequence(s)
      CH473971
      UniProtKB/TrEMBL
      A6IWV5, D4A092
      Related
      ENSRNOP00000004747.3, ENSRNOT00000004747.7
      Conserved Domains (1) summary
      pfam00635
      Location:14108
      Motile_Sperm; MSP (Major sperm protein) domain

    RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCr8

    Genomic

    1. NC_086036.1 Reference GRCr8

      Range
      41377129..41377946 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)