Fam149a family with sequence similarity 149, member A [Rattus norvegicus (Norway rat)] - Gene

Summary

Official Symbol: Fam149aprovided by RGD
Official Full Name: family with sequence similarity 149, member Aprovided by RGD
Primary source: RGD:1586153
See related: EnsemblRapid:ENSRNOG00000021693 AllianceGenome:RGD:1586153
Gene type: protein coding
RefSeq status: VALIDATED
Organism: Rattus norvegicus
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Summary: Orthologous to human FAM149A (family with sequence similarity 149 member A). [provided by Alliance of Genome Resources, Nov 2024]
Expression: Biased expression in Kidney (RPKM 400.5), Liver (RPKM 125.1) and 6 other tissues See more
Orthologs: human mouse all
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Genomic context

Location:: 16q11

Exon count:: 14

Annotation release	Status	Assembly	Chr	Location
RS_2024_02	current	GRCr8 (GCF_036323735.1)	16	NC_086034.1 (53587841..53647072)
RS_2023_06	previous assembly	mRatBN7.2 (GCF_015227675.2)	16	NC_051351.1 (46855377..46914553)
106	previous assembly	Rnor_6.0 (GCF_000001895.5)	16	NC_005115.4 (50049816..50105962)

Chromosome 16 - NC_086034.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

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Expression

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See details

Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
BioProject: PRJNA238328
Publication: PMID 24510058
Analysis date: Mon Jun 6 17:44:12 2016

Bibliography

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GeneRIFs: Gene References Into Functions

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General gene information

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Markers

RH129178 (e-PCR)
- UniSTS:212486

AW530202 (e-PCR)
- UniSTS:244515

RH144010 (e-PCR)
- UniSTS:233256

General protein information

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Preferred Names: protein FAM149A

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.