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    LOC101928663 uncharacterized LOC101928663 [ Homo sapiens (human) ]

    Gene ID: 101928663, updated on 17-Sep-2024

    Summary

    Gene symbol
    LOC101928663
    Gene description
    uncharacterized LOC101928663
    Gene type
    ncRNA
    RefSeq status
    VALIDATED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Expression
    Low expression observed in reference dataset See more
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    Genomic context

    See LOC101928663 in Genome Data Viewer
    Location:
    6p22.2
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 6 NC_000006.12 (25244916..25261407, complement)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 6 NC_060930.1 (25110708..25127195, complement)
    RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 6 NC_000006.11 (25245144..25261635, complement)

    Chromosome 6 - NC_000006.12Genomic Context describing neighboring genes Neighboring gene aryl hydrocarbon receptor pseudogene Neighboring gene uncharacterized LOC124901283 Neighboring gene katanin regulatory subunit B1 like 1 pseudogene 5 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 16995 Neighboring gene ribosomal protein L21 pseudogene 68 Neighboring gene HNRNPA3 pseudogene 17 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr6:25292659-25293159 Neighboring gene capping protein regulator and myosin 1 linker 1 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr6:25311331-25311831 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr6:25315887-25316577 Neighboring gene uncharacterized LOC124901281 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr6:25342051-25342783 Neighboring gene RNA, U6 small nuclear 987, pseudogene

    Genomic regions, transcripts, and products

    Expression

    • Project title: HPA RNA-seq normal tissues HPA RNA-seq normal tissues
    • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
    • BioProject: PRJEB4337
    • Publication: PMID 24309898
    • Analysis date: Wed Apr 4 07:08:55 2018

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_110862.1 RNA Sequence

      Status: VALIDATED

      Description
      Transcript Variant: This variant (1) represents the longer transcript.
      Source sequence(s)
      AL024509, BC029534
    2. NR_110863.1 RNA Sequence

      Status: VALIDATED

      Description
      Transcript Variant: This variant (2) lacks an internal exon and is shorter than variant 1.
      Source sequence(s)
      AL024509, BC029534, BC070354

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000006.12 Reference GRCh38.p14 Primary Assembly

      Range
      25244916..25261407 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060930.1 Alternate T2T-CHM13v2.0

      Range
      25110708..25127195 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)