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    LINC03123 long intergenic non-protein coding RNA 3123 [ Homo sapiens (human) ]

    Gene ID: 100506526, updated on 17-Sep-2024

    Summary

    Official Symbol
    LINC03123provided by HGNC
    Official Full Name
    long intergenic non-protein coding RNA 3123provided by HGNC
    Primary source
    HGNC:HGNC:52969
    See related
    Ensembl:ENSG00000251575 AllianceGenome:HGNC:52969
    Gene type
    ncRNA
    RefSeq status
    VALIDATED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Also known as
    C5orf64-AS1
    Expression
    Restricted expression toward testis (RPKM 3.3) See more
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    Genomic context

    See LINC03123 in Genome Data Viewer
    Location:
    5q12.1
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 5 NC_000005.10 (61732790..61735698, complement)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 5 NC_060929.1 (62551901..62554809, complement)
    RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 5 NC_000005.9 (61028617..61031525, complement)

    Chromosome 5 - NC_000005.10Genomic Context describing neighboring genes Neighboring gene long intergenic non-protein coding RNA 3122 Neighboring gene uncharacterized LOC101928651 Neighboring gene RNA, U6 small nuclear 913, pseudogene Neighboring gene heat shock protein family D (Hsp60) member 1 pseudogene 22 Neighboring gene H3K27ac hESC enhancer GRCh37_chr5:60968788-60969288 Neighboring gene uncharacterized LOC124900983 Neighboring gene uncharacterized LOC105378995

    Genomic regions, transcripts, and products

    Expression

    • Project title: HPA RNA-seq normal tissues HPA RNA-seq normal tissues
    • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
    • BioProject: PRJEB4337
    • Publication: PMID 24309898
    • Analysis date: Wed Apr 4 07:08:55 2018

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_105000.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AC094086, BC039381, HY019615
      Related
      ENST00000669357.1

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000005.10 Reference GRCh38.p14 Primary Assembly

      Range
      61732790..61735698 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060929.1 Alternate T2T-CHM13v2.0

      Range
      62551901..62554809 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)