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    MIR181C microRNA 181c [ Homo sapiens (human) ]

    Gene ID: 406957, updated on 17-Jun-2024

    Summary

    Official Symbol
    MIR181Cprovided by HGNC
    Official Full Name
    microRNA 181cprovided by HGNC
    Primary source
    HGNC:HGNC:31552
    See related
    Ensembl:ENSG00000207613 MIM:612746; miRBase:MI0000271; AllianceGenome:HGNC:31552
    Gene type
    ncRNA
    RefSeq status
    PROVISIONAL
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Also known as
    MIRN181C; mir-181c
    Summary
    microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009]
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    Genomic context

    See MIR181C in Genome Data Viewer
    Location:
    19p13.12
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 19 NC_000019.10 (13874699..13874808)
    RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 19 NC_060943.1 (14000855..14000964)
    105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 19 NC_000019.9 (13985513..13985622)

    Chromosome 19 - NC_000019.10Genomic Context describing neighboring genes Neighboring gene ATAC-STARR-seq lymphoblastoid active region 14141 Neighboring gene miR-23a/27a/24-2 cluster host gene Neighboring gene ATAC-STARR-seq lymphoblastoid active region 14142 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 14143 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 10212 Neighboring gene CRISPRi-validated cis-regulatory element chr19.2258 Neighboring gene microRNA 27a Neighboring gene microRNA 23a Neighboring gene ATAC-STARR-seq lymphoblastoid active region 14144 Neighboring gene ReSE screen-validated silencer GRCh37_chr19:13958655-13958860 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr19:13964511-13965456 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 14145 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 14146 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr19:13975386-13976271 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 10216 Neighboring gene nanos C2HC-type zinc finger 3 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 10217 Neighboring gene microRNA 181d Neighboring gene ATAC-STARR-seq lymphoblastoid active region 14147 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 14148 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 14149 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr19:13993737-13994582 Neighboring gene break repair meiotic recombinase recruitment factor 1 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr19:14000391-14000892

    Genomic regions, transcripts, and products

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Pathways from PubChem

    General gene information

    Other Names

    • hsa-mir-181c

    Gene Ontology Provided by GOA

    Function Evidence Code Pubs
    enables mRNA base-pairing translational repressor activity IDA
    Inferred from Direct Assay
    more info
    PubMed 
    enables single-stranded RNA binding IDA
    Inferred from Direct Assay
    more info
    PubMed 
    Process Evidence Code Pubs
    involved_in miRNA-mediated gene silencing by inhibition of translation IDA
    Inferred from Direct Assay
    more info
    PubMed 
    involved_in miRNA-mediated gene silencing by mRNA destabilization IDA
    Inferred from Direct Assay
    more info
    PubMed 
    involved_in miRNA-mediated post-transcriptional gene silencing IDA
    Inferred from Direct Assay
    more info
    PubMed 
    involved_in miRNA-mediated post-transcriptional gene silencing IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in microglial cell activation ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    acts_upstream_of negative regulation of T cell activation IDA
    Inferred from Direct Assay
    more info
    PubMed 
    acts_upstream_of negative regulation of activated T cell proliferation IDA
    Inferred from Direct Assay
    more info
    PubMed 
    involved_in negative regulation of astrocyte activation ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    involved_in negative regulation of inflammatory response IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in negative regulation of inflammatory response ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    involved_in negative regulation of interleukin-1 alpha production ISS
    Inferred from Sequence or Structural Similarity
    more info
    PubMed 
    acts_upstream_of negative regulation of interleukin-17 production IDA
    Inferred from Direct Assay
    more info
    PubMed 
    acts_upstream_of negative regulation of interleukin-2 production IDA
    Inferred from Direct Assay
    more info
    PubMed 
    acts_upstream_of negative regulation of interleukin-7 production IDA
    Inferred from Direct Assay
    more info
    PubMed 
    involved_in negative regulation of interleukin-7 production IDA
    Inferred from Direct Assay
    more info
    PubMed 
    involved_in negative regulation of neuron apoptotic process ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    acts_upstream_of negative regulation of synoviocyte proliferation IDA
    Inferred from Direct Assay
    more info
    PubMed 
    involved_in regulatory ncRNA-mediated gene silencing IDA
    Inferred from Direct Assay
    more info
    PubMed 
    Component Evidence Code Pubs
    part_of RISC complex IEA
    Inferred from Electronic Annotation
    more info
     
    located_in extracellular space HDA PubMed 

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_029613.1 RNA Sequence

      Status: PROVISIONAL

      Source sequence(s)
      AC020916
      Related
      ENST00000384881.1

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000019.10 Reference GRCh38.p14 Primary Assembly

      Range
      13874699..13874808
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Reference GRCh38.p14 PATCHES

    Genomic

    1. NW_021160022.1 Reference GRCh38.p14 PATCHES

      Range
      86540..86649
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060943.1 Alternate T2T-CHM13v2.0

      Range
      14000855..14000964
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)