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    Olfml3 olfactomedin-like 3 [ Rattus norvegicus (Norway rat) ]

    Gene ID: 310743, updated on 2-Nov-2024

    Summary

    Official Symbol
    Olfml3provided by RGD
    Official Full Name
    olfactomedin-like 3provided by RGD
    Primary source
    RGD:1311106
    See related
    EnsemblRapid:ENSRNOG00000019211 AllianceGenome:RGD:1311106
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Rattus norvegicus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
    Summary
    Predicted to be involved in signal transduction. Predicted to be active in extracellular space. Orthologous to human OLFML3 (olfactomedin like 3). [provided by Alliance of Genome Resources, Nov 2024]
    Expression
    Biased expression in Uterus (RPKM 282.1), Lung (RPKM 266.0) and 9 other tissues See more
    Orthologs
    NEW
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    Genomic context

    See Olfml3 in Genome Data Viewer
    Location:
    2q34
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCr8 (GCF_036323735.1) 2 NC_086020.1 (193932665..193935494, complement)
    RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 2 NC_051337.1 (191244221..191247050, complement)
    106 previous assembly Rnor_6.0 (GCF_000001895.5) 2 NC_005101.4 (206219419..206222248, complement)

    Chromosome 2 - NC_086020.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC102546891 Neighboring gene uncharacterized LOC134485944 Neighboring gene uncharacterized LOC134485758 Neighboring gene uncharacterized LOC102547265 Neighboring gene homeodomain interacting protein kinase 1 Neighboring gene uncharacterized LOC108350077 Neighboring gene DNA cross-link repair 1B

    Genomic regions, transcripts, and products

    Expression

    • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
    • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
    • BioProject: PRJNA238328
    • Publication: PMID 24510058
    • Analysis date: Mon Jun 6 17:44:12 2016

    General gene information

    Markers

    Gene Ontology Provided by RGD

    Process Evidence Code Pubs
    involved_in signal transduction IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    Component Evidence Code Pubs
    is_active_in extracellular space IBA
    Inferred from Biological aspect of Ancestor
    more info
     

    General protein information

    Preferred Names
    olfactomedin-like protein 3

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001107708.1NP_001101178.1  olfactomedin-like protein 3 precursor

      See identical proteins and their annotated locations for NP_001101178.1

      Status: PROVISIONAL

      Source sequence(s)
      CH474015
      UniProtKB/Swiss-Prot
      B0BNI5
      UniProtKB/TrEMBL
      A6K3M1, G3V8H7
      Related
      ENSRNOP00000026075.3, ENSRNOT00000026075.6
      Conserved Domains (1) summary
      pfam02191
      Location:151407
      OLF; Olfactomedin-like domain

    RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCr8

    Genomic

    1. NC_086020.1 Reference GRCr8

      Range
      193932665..193935494 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)