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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
Genomic
-
NG_051183.2 RefSeqGene
- Range
-
362817..682045
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
NM_001191056.3 → NP_001177985.1 dual specificity calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1C isoform 1
See identical proteins and their annotated locations for NP_001177985.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (1) differs in the 5' and 3' UTR and has multiple coding region differences, compared to variant 3. These differences result in an isoform (1) with distinct N- and C-termini, compared to isoform 3. Variants 1 and 4 encode the same protein. Isoform 1 is also known as HCam-3B.
- Source sequence(s)
-
AC004931, AC006377, AK056170, AK125029, BM668260, U40371
- Consensus CDS
-
CCDS5437.1
- UniProtKB/TrEMBL
-
Q8TAE4
- Related
- ENSP00000379485.2, ENST00000396182.6
- Conserved Domains (2) summary
-
- pfam00233
Location:227 → 445
- PDEase_I; 3'5'-cyclic nucleotide phosphodiesterase
- pfam08499
Location:86 → 142
- PDEase_I_N; 3'5'-cyclic nucleotide phosphodiesterase N-terminal
-
NM_001191057.4 → NP_001177986.1 dual specificity calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1C isoform 2
See identical proteins and their annotated locations for NP_001177986.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (2) differs in the 5' UTR and has multiple coding region differences, compared to variant 3. These differences result in an isoform (2) with a distinct N-terminus, compared to isoform 3. Variants 2 and 5 encode the same protein. Isoform 2 is also known as HCam-3A.
- Source sequence(s)
-
AC006377, AC007093, AI168057, AI301181, AK056170, CB135276, HY125708
- Consensus CDS
-
CCDS55099.1
- UniProtKB/Swiss-Prot
- B3KPC6, E9PE92, Q14123, Q14124, Q8NB10
- UniProtKB/TrEMBL
-
B3KSS6
- Related
- ENSP00000379494.1, ENST00000396191.6
- Conserved Domains (2) summary
-
- pfam00233
Location:227 → 455
- PDEase_I; 3'5'-cyclic nucleotide phosphodiesterase
- pfam08499
Location:86 → 142
- PDEase_I_N; 3'5'-cyclic nucleotide phosphodiesterase N-terminal
-
NM_001191058.4 → NP_001177987.2 dual specificity calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1C isoform 3
Status: REVIEWED
- Description
- Transcript Variant: This variant (3) encodes the longest isoform (3). Variants 3 and 10 encode isoforms that are the same length, but have distinct protein sequences.
- Source sequence(s)
-
AC006377, AC007093, AC018637, AI168057, AI301181, AK056170, AK091734, CB135276, HY125708
- Consensus CDS
-
CCDS55100.1
- UniProtKB/TrEMBL
- A0A0A0MS69, B3KSS6
- Related
- ENSP00000379496.1, ENST00000396193.5
- Conserved Domains (2) summary
-
- pfam00233
Location:287 → 515
- PDEase_I; 3'5'-cyclic nucleotide phosphodiesterase
- pfam08499
Location:142 → 202
- PDEase_I_N; 3'5'-cyclic nucleotide phosphodiesterase N-terminal
-
NM_001191059.4 → NP_001177988.1 dual specificity calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1C isoform 2
See identical proteins and their annotated locations for NP_001177988.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (5) differs in the 5' UTR and has multiple coding region differences, compared to variant 3. These differences result in an isoform (2) with a distinct N-terminus, compared to isoform 3. Variants 2 and 5 encode the same protein. Isoform 2 is also known as HCam-3A.
- Source sequence(s)
-
AC006377, AC007093, AI168057, AI301181, AK056170, CB135276, DA023468, HY125708
- Consensus CDS
-
CCDS55099.1
- UniProtKB/Swiss-Prot
- B3KPC6, E9PE92, Q14123, Q14124, Q8NB10
- UniProtKB/TrEMBL
-
B3KSS6
- Related
- ENSP00000318105.7, ENST00000321453.12
- Conserved Domains (2) summary
-
- pfam00233
Location:227 → 455
- PDEase_I; 3'5'-cyclic nucleotide phosphodiesterase
- pfam08499
Location:86 → 142
- PDEase_I_N; 3'5'-cyclic nucleotide phosphodiesterase N-terminal
-
NM_001322055.2 → NP_001308984.1 dual specificity calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1C isoform 2
Status: REVIEWED
- Source sequence(s)
-
AC004931, AC006377, AC007093, AI168057, AI301181, AK056170, CB135276, DA174241, DA231237, HY125708
- Consensus CDS
-
CCDS55099.1
- UniProtKB/Swiss-Prot
- B3KPC6, E9PE92, Q14123, Q14124, Q8NB10
- UniProtKB/TrEMBL
-
B3KSS6
- Conserved Domains (2) summary
-
- pfam00233
Location:227 → 455
- PDEase_I; 3'5'-cyclic nucleotide phosphodiesterase
- pfam08499
Location:86 → 142
- PDEase_I_N; 3'5'-cyclic nucleotide phosphodiesterase N-terminal
-
NM_001322056.2 → NP_001308985.1 dual specificity calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1C isoform 1
Status: REVIEWED
- Source sequence(s)
-
AC004931, AC006377
- Consensus CDS
-
CCDS5437.1
- UniProtKB/TrEMBL
-
Q8TAE4
- Conserved Domains (2) summary
-
- pfam00233
Location:227 → 445
- PDEase_I; 3'5'-cyclic nucleotide phosphodiesterase
- pfam08499
Location:86 → 142
- PDEase_I_N; 3'5'-cyclic nucleotide phosphodiesterase N-terminal
-
NM_001322057.2 → NP_001308986.1 dual specificity calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1C isoform 1
Status: REVIEWED
- Source sequence(s)
-
AC004931, AC006377
- Consensus CDS
-
CCDS5437.1
- UniProtKB/TrEMBL
-
Q8TAE4
- Conserved Domains (2) summary
-
- pfam00233
Location:227 → 445
- PDEase_I; 3'5'-cyclic nucleotide phosphodiesterase
- pfam08499
Location:86 → 142
- PDEase_I_N; 3'5'-cyclic nucleotide phosphodiesterase N-terminal
-
NM_001322058.2 → NP_001308987.1 dual specificity calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1C isoform 4
Status: REVIEWED
- Source sequence(s)
-
AC005589, AC006377, AC018637, KF458425
- UniProtKB/TrEMBL
-
Q75MP2
- Conserved Domains (2) summary
-
- pfam00233
Location:287 → 505
- PDEase_I; 3'5'-cyclic nucleotide phosphodiesterase
- pfam08499
Location:146 → 202
- PDEase_I_N; 3'5'-cyclic nucleotide phosphodiesterase N-terminal
-
NM_001322059.2 → NP_001308988.1 dual specificity calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1C isoform 5
Status: REVIEWED
- Description
- Transcript Variant: Variants 3 and 10 encode isoforms that are the same length, but have distinct protein sequences.
- Source sequence(s)
-
AC005589, AC006377, AC018637, KF458425
- UniProtKB/Swiss-Prot
-
Q14123
- Conserved Domains (2) summary
-
- pfam00233
Location:362 → 590
- PDEase_I; 3'5'-cyclic nucleotide phosphodiesterase
- pfam08499
Location:221 → 277
- PDEase_I_N; 3'5'-cyclic nucleotide phosphodiesterase N-terminal
-
NM_005020.5 → NP_005011.1 dual specificity calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1C isoform 1
See identical proteins and their annotated locations for NP_005011.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (4) differs in the 5' and 3' UTR and has multiple coding region differences, compared to variant 3. These differences result in an isoform (1) with distinct N- and C-termini, compared to isoform 3. Variants 1 and 4 encode the same protein. Isoform 1 is also known as HCam-3B.
- Source sequence(s)
-
AC004931, AC006377
- Consensus CDS
-
CCDS5437.1
- UniProtKB/TrEMBL
-
Q8TAE4
- Related
- ENSP00000379487.3, ENST00000396184.7
- Conserved Domains (2) summary
-
- pfam00233
Location:227 → 445
- PDEase_I; 3'5'-cyclic nucleotide phosphodiesterase
- pfam08499
Location:86 → 142
- PDEase_I_N; 3'5'-cyclic nucleotide phosphodiesterase N-terminal
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCh38.p14 Primary Assembly
Genomic
-
NC_000007.14 Reference GRCh38.p14 Primary Assembly
- Range
-
31616777..32428224 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_047420443.1 → XP_047276399.1 dual specificity calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1C isoform X5
-
XM_047420442.1 → XP_047276398.1 dual specificity calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1C isoform X5
-
XM_047420441.1 → XP_047276397.1 dual specificity calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1C isoform X5
-
XM_017012264.1 → XP_016867753.1 dual specificity calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1C isoform X1
- UniProtKB/TrEMBL
-
B3KSS6
-
XM_017012265.1 → XP_016867754.1 dual specificity calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1C isoform X2
- UniProtKB/TrEMBL
-
B3KSS6
-
XM_047420440.1 → XP_047276396.1 dual specificity calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1C isoform X4
- UniProtKB/Swiss-Prot
- B3KPC6, E9PE92, Q14123, Q14124, Q8NB10
-
XM_017012267.2 → XP_016867756.1 dual specificity calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1C isoform X4
- UniProtKB/Swiss-Prot
- B3KPC6, E9PE92, Q14123, Q14124, Q8NB10
- UniProtKB/TrEMBL
-
B3KSS6
- Conserved Domains (2) summary
-
- pfam00233
Location:227 → 455
- PDEase_I; 3'5'-cyclic nucleotide phosphodiesterase
- pfam08499
Location:86 → 142
- PDEase_I_N; 3'5'-cyclic nucleotide phosphodiesterase N-terminal
-
XM_047420445.1 → XP_047276401.1 dual specificity calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1C isoform X7
-
XM_017012266.2 → XP_016867755.1 dual specificity calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1C isoform X3
- UniProtKB/TrEMBL
-
Q75MP2
-
XM_047420444.1 → XP_047276400.1 dual specificity calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1C isoform X6
-
XM_047420446.1 → XP_047276402.1 dual specificity calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1C isoform X8
RNA
-
XR_001744802.1 RNA Sequence
-
XR_001744803.1 RNA Sequence
-
XR_007060044.1 RNA Sequence
-
XR_007060042.1 RNA Sequence
-
XR_007060043.1 RNA Sequence
-
XR_007060041.1 RNA Sequence
Alternate T2T-CHM13v2.0
Genomic
-
NC_060931.1 Alternate T2T-CHM13v2.0
- Range
-
31754475..32567499 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_054358337.1 → XP_054214312.1 dual specificity calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1C isoform X5
-
XM_054358336.1 → XP_054214311.1 dual specificity calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1C isoform X5
-
XM_054358335.1 → XP_054214310.1 dual specificity calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1C isoform X5
-
XM_054358330.1 → XP_054214305.1 dual specificity calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1C isoform X1
-
XM_054358331.1 → XP_054214306.1 dual specificity calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1C isoform X2
-
XM_054358333.1 → XP_054214308.1 dual specificity calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1C isoform X4
- UniProtKB/Swiss-Prot
- B3KPC6, E9PE92, Q14123, Q14124, Q8NB10
-
XM_054358334.1 → XP_054214309.1 dual specificity calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1C isoform X4
- UniProtKB/Swiss-Prot
- B3KPC6, E9PE92, Q14123, Q14124, Q8NB10
-
XM_054358332.1 → XP_054214307.1 dual specificity calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1C isoform X3
-
XM_054358338.1 → XP_054214313.1 dual specificity calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1C isoform X6
-
XM_054358339.1 → XP_054214314.1 dual specificity calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1C isoform X8
RNA
-
XR_008487624.1 RNA Sequence
-
XR_008487625.1 RNA Sequence
-
XR_008487629.1 RNA Sequence
-
XR_008487627.1 RNA Sequence
-
XR_008487628.1 RNA Sequence
-
XR_008487626.1 RNA Sequence