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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001289934.2 → NP_001276863.1 leucine-rich repeat and calponin homology domain-containing protein 4 isoform 2
See identical proteins and their annotated locations for NP_001276863.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (2) uses an alternate splice site in the 3' coding region compared to variant 1. The resulting protein (isoform 2) is shorter and has a distinct C-terminus compared to isoform 1.
- Source sequence(s)
-
AI491709, BC007634, BC018529, DC397219, DR422652
- Consensus CDS
-
CCDS94156.1
- UniProtKB/TrEMBL
-
H7C5D9
- Related
- ENSP00000419674.2, ENST00000485554.6
- Conserved Domains (5) summary
-
- cd00116
Location:103 → 245
- LRR_RI; Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond ...
- sd00033
Location:46 → 69
- LRR_RI; leucine-rich repeat [structural motif]
- pfam00307
Location:537 → 630
- CH; Calponin homology (CH) domain
- pfam12799
Location:92 → 131
- LRR_4; Leucine Rich repeats (2 copies)
- pfam13855
Location:138 → 194
- LRR_8; Leucine rich repeat
-
NM_002319.5 → NP_002310.2 leucine-rich repeat and calponin homology domain-containing protein 4 isoform 1
See identical proteins and their annotated locations for NP_002310.2
Status: REVIEWED
- Description
- Transcript Variant: This variant (1) represents the longer transcript and encodes the longer protein (isoform 1).
- Source sequence(s)
-
AI491709, BC007634, BC018529, DC397219, DR422652
- Consensus CDS
-
CCDS34706.1
- UniProtKB/Swiss-Prot
- A4D2D5, O75427, Q8WV85, Q96ID0
- Related
- ENSP00000309689.6, ENST00000310300.11
- Conserved Domains (5) summary
-
- cd00116
Location:103 → 245
- LRR_RI; Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond ...
- sd00033
Location:46 → 69
- LRR_RI; leucine-rich repeat [structural motif]
- pfam00307
Location:537 → 627
- CH; Calponin homology (CH) domain
- pfam12799
Location:92 → 131
- LRR_4; Leucine Rich repeats (2 copies)
- pfam13855
Location:138 → 194
- LRR_8; Leucine rich repeat