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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001306173.2 → NP_001293102.1 alanine--glyoxylate aminotransferase 2, mitochondrial isoform b precursor
Status: REVIEWED
- Description
- Transcript Variant: This variant (2) lacks two alternate exons, resulting in the loss of an in-frame segment in the central coding region, compared to variant 1. The encoded isoform (b) is shorter than isoform a.
- Source sequence(s)
-
AJ292204, BC144268, DA633665
- Consensus CDS
-
CCDS78000.1
- UniProtKB/TrEMBL
-
B2RBJ5
- Related
- ENSP00000422799.1, ENST00000510428.1
- Conserved Domains (1) summary
-
- cd00610
Location:70 → 430
- OAT_like; Acetyl ornithine aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to ornithine aminotransferase, acetylornithine aminotransferase, ...
-
NM_031900.4 → NP_114106.1 alanine--glyoxylate aminotransferase 2, mitochondrial isoform a precursor
See identical proteins and their annotated locations for NP_114106.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (1) represents the longer transcript and encodes the longer isoform (a).
- Source sequence(s)
-
AJ292204, DA633665
- Consensus CDS
-
CCDS3908.1
- UniProtKB/Swiss-Prot
- B7ZM47, E9PDL7, Q53FB4, Q53FY7, Q53G03, Q5W7Q1, Q9BYV1
- UniProtKB/TrEMBL
-
B2RBJ5
- Related
- ENSP00000231420.6, ENST00000231420.11
- Conserved Domains (2) summary
-
- cd00610
Location:70 → 505
- OAT_like; Acetyl ornithine aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to ornithine aminotransferase, acetylornithine aminotransferase, ...
- COG0160
Location:65 → 508
- GabT; 4-aminobutyrate aminotransferase or related aminotransferase [Amino acid transport and metabolism]
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCh38.p14 Primary Assembly
Genomic
-
NC_000005.10 Reference GRCh38.p14 Primary Assembly
- Range
-
34998102..35047949 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_047417534.1 → XP_047273490.1 alanine--glyoxylate aminotransferase 2, mitochondrial isoform X4
-
XM_005248337.4 → XP_005248394.1 alanine--glyoxylate aminotransferase 2, mitochondrial isoform X1
- UniProtKB/TrEMBL
-
B2RBJ5
- Conserved Domains (2) summary
-
- cd00610
Location:69 → 504
- OAT_like; Acetyl ornithine aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to ornithine aminotransferase, acetylornithine aminotransferase, ...
- COG0160
Location:64 → 507
- GabT; 4-aminobutyrate aminotransferase or related aminotransferase [Amino acid transport and metabolism]
-
XM_005248338.4 → XP_005248395.1 alanine--glyoxylate aminotransferase 2, mitochondrial isoform X2
- UniProtKB/TrEMBL
-
B2RBJ5
- Conserved Domains (2) summary
-
- cd00610
Location:70 → 440
- OAT_like; Acetyl ornithine aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to ornithine aminotransferase, acetylornithine aminotransferase, ...
- COG0160
Location:65 → 443
- GabT; 4-aminobutyrate aminotransferase or related aminotransferase [Amino acid transport and metabolism]
-
XM_017009748.3 → XP_016865237.1 alanine--glyoxylate aminotransferase 2, mitochondrial isoform X3
- UniProtKB/TrEMBL
-
B2RBJ5
- Related
- ENSP00000479154.1, ENST00000618015.4
- Conserved Domains (1) summary
-
- cd00610
Location:70 → 430
- OAT_like; Acetyl ornithine aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to ornithine aminotransferase, acetylornithine aminotransferase, ...
Alternate T2T-CHM13v2.0
Genomic
-
NC_060929.1 Alternate T2T-CHM13v2.0
- Range
-
35245145..35294998 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_054353177.1 → XP_054209152.1 alanine--glyoxylate aminotransferase 2, mitochondrial isoform X4
-
XM_054353174.1 → XP_054209149.1 alanine--glyoxylate aminotransferase 2, mitochondrial isoform X1
-
XM_054353175.1 → XP_054209150.1 alanine--glyoxylate aminotransferase 2, mitochondrial isoform X2
-
XM_054353176.1 → XP_054209151.1 alanine--glyoxylate aminotransferase 2, mitochondrial isoform X3