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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
Genomic
-
NG_047115.1 RefSeqGene
- Range
-
5127..103077
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
NM_001023587.3 → NP_001018881.1 ATP-binding cassette sub-family C member 5 isoform 2
See identical proteins and their annotated locations for NP_001018881.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (2) lacks several exons and contains an alternate 3' structure, compared to variant 1. It encodes isoform 2 which is shorter and has a distinct C-terminus, compared to isoform 1.
- Source sequence(s)
-
AY754875
- Consensus CDS
-
CCDS33898.1
- UniProtKB/TrEMBL
-
A5PKY6
- Related
- ENSP00000371934.2, ENST00000382494.6
- Conserved Domains (1) summary
-
- PLN03232
Location:100 → 156
- PLN03232; ABC transporter C family member; Provisional
-
NM_001320032.2 → NP_001306961.1 ATP-binding cassette sub-family C member 5 isoform 3
Status: REVIEWED
- Description
- Transcript Variant: This variant (3) uses an alternate splice site, resulting in the use of a downstream start codon, compared to variant 1. It encodes isoform 3 which has a shorter N-terminus compared to isoform 1.
- Source sequence(s)
-
AF104942, BC144495, CN410200, HY073434
- UniProtKB/Swiss-Prot
-
O15440
- Conserved Domains (1) summary
-
- PLN03130
Location:103 → 953
- PLN03130; ABC transporter C family member; Provisional
-
NM_005688.4 → NP_005679.2 ATP-binding cassette sub-family C member 5 isoform 1
See identical proteins and their annotated locations for NP_005679.2
Status: REVIEWED
- Description
- Transcript Variant: This variant (1) encodes the longest isoform (1).
- Source sequence(s)
-
AB019002, AC068644, AF104942, AW207515, CN410200, HY073434
- Consensus CDS
-
CCDS43176.1
- UniProtKB/Swiss-Prot
- B9EIQ2, O14517, O15440, Q29ZA9, Q29ZB1, Q86UX3, Q86W30, Q9UN85, Q9UNP5, Q9UQC3
- UniProtKB/TrEMBL
-
Q59FK6
- Related
- ENSP00000333926.6, ENST00000334444.11
- Conserved Domains (4) summary
-
- cd03244
Location:1191 → 1411
- ABCC_MRP_domain2; ATP-binding cassette domain 2 of multidrug resistance-associated protein
- cd03250
Location:577 → 759
- ABCC_MRP_domain1; ATP-binding cassette domain 1 of multidrug resistance-associated protein, subfamily C
- TIGR01271
Location:100 → 1430
- CFTR_protein; cystic fibrosis transmembrane conductor regulator (CFTR)
- cl00549
Location:863 → 1143
- ABC_membrane; ABC transporter transmembrane region
RNA
-
NR_135125.2 RNA Sequence
Status: REVIEWED
- Description
- Transcript Variant: This variant (4) lacks several alternate exons, and contains an alternate 3' structure, compared to variant 1. This variant is represented as non-coding because the use of the 5' most supported translational start codon, as used in variant 1, renders the transcript a candidate for nonsense-mediated mRNA decay (NMD).
- Source sequence(s)
-
AY754874
- Related
-
ENST00000443376.5
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCh38.p14 Primary Assembly
Genomic
-
NC_000003.12 Reference GRCh38.p14 Primary Assembly
- Range
-
183919934..184017884 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_005247059.6 → XP_005247116.1 ATP-binding cassette sub-family C member 5 isoform X1
See identical proteins and their annotated locations for XP_005247116.1
- UniProtKB/Swiss-Prot
- B9EIQ2, O14517, O15440, Q29ZA9, Q29ZB1, Q86UX3, Q86W30, Q9UN85, Q9UNP5, Q9UQC3
- UniProtKB/TrEMBL
-
Q59FK6
- Conserved Domains (4) summary
-
- cd03244
Location:1191 → 1411
- ABCC_MRP_domain2; ATP-binding cassette domain 2 of multidrug resistance-associated protein
- cd03250
Location:577 → 759
- ABCC_MRP_domain1; ATP-binding cassette domain 1 of multidrug resistance-associated protein, subfamily C
- TIGR01271
Location:100 → 1430
- CFTR_protein; cystic fibrosis transmembrane conductor regulator (CFTR)
- cl00549
Location:863 → 1143
- ABC_membrane; ABC transporter transmembrane region
-
XM_011512314.3 → XP_011510616.1 ATP-binding cassette sub-family C member 5 isoform X1
See identical proteins and their annotated locations for XP_011510616.1
- UniProtKB/Swiss-Prot
- B9EIQ2, O14517, O15440, Q29ZA9, Q29ZB1, Q86UX3, Q86W30, Q9UN85, Q9UNP5, Q9UQC3
- UniProtKB/TrEMBL
-
Q59FK6
- Conserved Domains (4) summary
-
- cd03244
Location:1191 → 1411
- ABCC_MRP_domain2; ATP-binding cassette domain 2 of multidrug resistance-associated protein
- cd03250
Location:577 → 759
- ABCC_MRP_domain1; ATP-binding cassette domain 1 of multidrug resistance-associated protein, subfamily C
- TIGR01271
Location:100 → 1430
- CFTR_protein; cystic fibrosis transmembrane conductor regulator (CFTR)
- cl00549
Location:863 → 1143
- ABC_membrane; ABC transporter transmembrane region
-
XM_047447098.1 → XP_047303054.1 ATP-binding cassette sub-family C member 5 isoform X1
- UniProtKB/Swiss-Prot
- B9EIQ2, O14517, O15440, Q29ZA9, Q29ZB1, Q86UX3, Q86W30, Q9UN85, Q9UNP5, Q9UQC3
-
XM_011512315.2 → XP_011510617.1 ATP-binding cassette sub-family C member 5 isoform X2
- UniProtKB/TrEMBL
-
Q59FK6
- Conserved Domains (4) summary
-
- cd03250
Location:577 → 759
- ABCC_MRP_domain1; ATP-binding cassette domain 1 of multidrug resistance-associated protein, subfamily C
- COG1132
Location:165 → 782
- MdlB; ABC-type multidrug transport system, ATPase and permease component [Defense mechanisms]
- cl00549
Location:863 → 1143
- ABC_membrane; ABC transporter transmembrane region
- cl21455
Location:1191 → 1310
- P-loop_NTPase; P-loop containing Nucleoside Triphosphate Hydrolases
-
XM_017005493.2 → XP_016860982.1 ATP-binding cassette sub-family C member 5 isoform X3
- UniProtKB/TrEMBL
-
A5PKY6
- Related
- ENSP00000404809.2, ENST00000427120.6
- Conserved Domains (1) summary
-
- PLN03232
Location:100 → 156
- PLN03232; ABC transporter C family member; Provisional
-
XM_047447100.1 → XP_047303056.1 ATP-binding cassette sub-family C member 5 isoform X3
-
XM_047447099.1 → XP_047303055.1 ATP-binding cassette sub-family C member 5 isoform X3
Alternate T2T-CHM13v2.0
Genomic
-
NC_060927.1 Alternate T2T-CHM13v2.0
- Range
-
186729643..186827475 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_054344829.1 → XP_054200804.1 ATP-binding cassette sub-family C member 5 isoform X1
- UniProtKB/Swiss-Prot
- B9EIQ2, O14517, O15440, Q29ZA9, Q29ZB1, Q86UX3, Q86W30, Q9UN85, Q9UNP5, Q9UQC3
-
XM_054344826.1 → XP_054200801.1 ATP-binding cassette sub-family C member 5 isoform X1
- UniProtKB/Swiss-Prot
- B9EIQ2, O14517, O15440, Q29ZA9, Q29ZB1, Q86UX3, Q86W30, Q9UN85, Q9UNP5, Q9UQC3
-
XM_054344827.1 → XP_054200802.1 ATP-binding cassette sub-family C member 5 isoform X1
- UniProtKB/Swiss-Prot
- B9EIQ2, O14517, O15440, Q29ZA9, Q29ZB1, Q86UX3, Q86W30, Q9UN85, Q9UNP5, Q9UQC3
-
XM_054344828.1 → XP_054200803.1 ATP-binding cassette sub-family C member 5 isoform X1
- UniProtKB/Swiss-Prot
- B9EIQ2, O14517, O15440, Q29ZA9, Q29ZB1, Q86UX3, Q86W30, Q9UN85, Q9UNP5, Q9UQC3
-
XM_054344830.1 → XP_054200805.1 ATP-binding cassette sub-family C member 5 isoform X2
-
XM_054344831.1 → XP_054200806.1 ATP-binding cassette sub-family C member 5 isoform X3
-
XM_054344833.1 → XP_054200808.1 ATP-binding cassette sub-family C member 5 isoform X3
-
XM_054344832.1 → XP_054200807.1 ATP-binding cassette sub-family C member 5 isoform X3