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    C19orf81 chromosome 19 open reading frame 81 [ Homo sapiens (human) ]

    Gene ID: 342918, updated on 10-Oct-2024

    Summary

    Official Symbol
    C19orf81provided by HGNC
    Official Full Name
    chromosome 19 open reading frame 81provided by HGNC
    Primary source
    HGNC:HGNC:40041
    See related
    Ensembl:ENSG00000235034 AllianceGenome:HGNC:40041
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Expression
    Low expression observed in reference dataset See more
    Orthologs
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    Genomic context

    See C19orf81 in Genome Data Viewer
    Location:
    19q13.33
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 19 NC_000019.10 (50649445..50659306)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 19 NC_060943.1 (53738178..53748031)
    RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 19 NC_000019.9 (51152702..51162563)

    Chromosome 19 - NC_000019.10Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC124904747 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 14993 Neighboring gene leucine rich repeat containing 4B Neighboring gene H3K4me1 hESC enhancer GRCh37_chr19:51055019-51055930 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 10972 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 10973 Neighboring gene CRISPRi-validated cis-regulatory element chr19.5650 Neighboring gene small NF90 (ILF3) associated RNA F Neighboring gene Sharpr-MPRA regulatory region 12037 Neighboring gene Sharpr-MPRA regulatory region 12891 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 14994 Neighboring gene synaptotagmin 3 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 14995 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 10974 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr19:51165023-51165681 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr19:51165682-51166339 Neighboring gene SH3 and multiple ankyrin repeat domains 1 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 10975 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 10976 Neighboring gene CRISPRi-validated cis-regulatory element chr19.5690 Neighboring gene C-type lectin domain containing 11A Neighboring gene GPR32 pseudogene 1

    Genomic regions, transcripts, and products

    Expression

    • Project title: HPA RNA-seq normal tissues HPA RNA-seq normal tissues
    • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
    • BioProject: PRJEB4337
    • Publication: PMID 24309898
    • Analysis date: Wed Apr 4 07:08:55 2018

    General protein information

    Preferred Names
    putative uncharacterized protein C19orf81

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001195076.2NP_001182005.1  putative uncharacterized protein C19orf81

      See identical proteins and their annotated locations for NP_001182005.1

      Status: VALIDATED

      Source sequence(s)
      AC008743
      Consensus CDS
      CCDS54296.1
      UniProtKB/Swiss-Prot
      C9J6K1
      Related
      ENSP00000417035.1, ENST00000425202.6
      Conserved Domains (1) summary
      pfam15876
      Location:23181
      DUF4732; Domain of unknown function (DUF4732)

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000019.10 Reference GRCh38.p14 Primary Assembly

      Range
      50649445..50659306
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_047438759.1XP_047294715.1  putative uncharacterized protein C19orf81 isoform X1

      Related
      ENSP00000391035.2, ENST00000458538.1

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060943.1 Alternate T2T-CHM13v2.0

      Range
      53738178..53748031
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_054320844.1XP_054176819.1  putative uncharacterized protein C19orf81 isoform X1