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    LINC00997 long intergenic non-protein coding RNA 997 [ Homo sapiens (human) ]

    Gene ID: 401321, updated on 17-Sep-2024

    Summary

    Official Symbol
    LINC00997provided by HGNC
    Official Full Name
    long intergenic non-protein coding RNA 997provided by HGNC
    Primary source
    HGNC:HGNC:48952
    See related
    AllianceGenome:HGNC:48952
    Gene type
    ncRNA
    RefSeq status
    VALIDATED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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    Genomic context

    See LINC00997 in Genome Data Viewer
    Location:
    7p14.3
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 7 NC_000007.14 (32758286..32762924)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 7 NC_060931.1 (32897882..32902516)
    RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 7 NC_000007.13 (32797898..32802536)

    Chromosome 7 - NC_000007.14Genomic Context describing neighboring genes Neighboring gene ATAC-STARR-seq lymphoblastoid active region 25830 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 18079 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 18080 Neighboring gene zinc and ring finger 2 pseudogene 1 Neighboring gene microRNA 550a-2 Neighboring gene microRNA 550b-2 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr7:32827661-32828162 Neighboring gene ReSE screen-validated silencer GRCh37_chr7:32832110-32832299 Neighboring gene NANOG hESC enhancer GRCh37_chr7:32872065-32872605 Neighboring gene DPY19L1 pseudogene 2 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr7:32884101-32884602 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr7:32884603-32885102 Neighboring gene kelch repeat and BTB domain containing 2 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr7:32928372-32928897 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr7:32931453-32932156

    Genomic regions, transcripts, and products

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_036501.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AC018645

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000007.14 Reference GRCh38.p14 Primary Assembly

      Range
      32758286..32762924
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060931.1 Alternate T2T-CHM13v2.0

      Range
      32897882..32902516
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)