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    • Showing Current items.

    ift-43 Intraflagellar transport protein 43 homolog [ Caenorhabditis elegans ]

    Gene ID: 173959, updated on 12-Jun-2024

    Summary

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    Gene symbol
    ift-43
    Gene description
    Intraflagellar transport protein 43 homolog
    Locus tag
    CELE_C25H3.12
    See related
    AllianceGenome:WB:WBGene00016121
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to be located in cilium. Is expressed in ciliated neurons. [provided by Alliance of Genome Resources, Apr 2022]
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    Genomic context

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    See ift-43 in Genome Data Viewer
    Location:
    chromosome: II
    Exon count:
    5
    Sequence:
    Chromosome: II; NC_003280.10 (5659881..5660786, complement)

    Chromosome II - NC_003280.10Genomic Context describing neighboring genes Neighboring gene Bromo domain-containing protein Neighboring gene Alpha-(1,3)-fucosyltransferase fut-3 Neighboring gene TFIIS N-terminal domain-containing protein Neighboring gene Secreted protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003280.10

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Dynein-Driven Retrograde Intraflagellar Transport Is Triphasic in C. elegans Sensory Cilia. Yi P, et al. Curr Biol, 2017 May 22. PMID 28479320
    2. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by WormBase

    Component Evidence Code Pubs
    located_in cell projection IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in cilium IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    Intraflagellar transport protein 43 homolog
    NP_495107.1
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003280.10 Reference assembly

      Range
      5659881..5660786 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_062706.4 → NP_495107.1  Intraflagellar transport protein 43 homolog [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_495107.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9BIA4
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9BIA4.1

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