U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    nlp-16 [ Caenorhabditis elegans ]

    Gene ID: 177387, updated on 22-Aug-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    nlp-16
    Primary source
    WormBase:WBGene00003754
    Locus tag
    CELE_T13A10.5
    See related
    AllianceGenome:WB:WBGene00003754
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to be involved in neuropeptide signaling pathway. Is expressed in head neurons; intestine; and lateral ganglion. [provided by Alliance of Genome Resources, Apr 2022]
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    Location:
    chromosome: IV
    Exon count:
    4
    Sequence:
    Chromosome: IV; NC_003282.8 (6255049..6259832, complement)

    Chromosome IV - NC_003282.8Genomic Context describing neighboring genes Neighboring gene Uncharacterized protein Neighboring gene RING-type domain-containing protein Neighboring gene Uncharacterized protein Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_003282.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Identification of neuropeptide-like protein gene families in Caenorhabditiselegans and other species. Nathoo AN, et al. Proc Natl Acad Sci U S A, 2001 Nov 20. PMID 11717458, Free PMC Article
    2. Defective processing of neuropeptide precursors in Caenorhabditis elegans lacking proprotein convertase 2 (KPC-2/EGL-3): mutant analysis by mass spectrometry. Husson SJ, et al. J Neurochem, 2006 Sep. PMID 16945111
    3. Neuropeptide gene families in the nematode Caenorhabditis elegans. Li C, et al. Ann N Y Acad Sci, 1999. PMID 10676452
    4. Discovering neuropeptides in Caenorhabditis elegans by two dimensional liquid chromatography and mass spectrometry. Husson SJ, et al. Biochem Biophys Res Commun, 2005 Sep 16. PMID 16061202
    5. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Markers

    Homology

    General protein information

    Go to the top of the page Help
    Preferred Names
    Histidine-rich glycoprotein-like
    NP_001023384.1
    • Confirmed by transcript evidence
    NP_001293783.1
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003282.8 Reference assembly

      Range
      6255049..6259832 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001306854.3 → NP_001293783.1  Histidine-rich glycoprotein-like [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_001293783.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      V6CJ99
      Conserved Domains (1) summary
      TIGR00927
      Location:30 → 254
      2A1904; K+-dependent Na+/Ca+ exchanger

    2. NM_001028213.5 → NP_001023384.1  Histidine-rich glycoprotein-like [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_001023384.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q22442
      Conserved Domains (1) summary
      TIGR00927
      Location:30 → 254
      2A1904; K+-dependent Na+/Ca+ exchanger
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases
    Research Materials
    Tools