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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001308135.2 → NP_001295064.1 protein archease isoform 2
Status: VALIDATED
- Description
- Transcript Variant: This variant (2) lacks an alternate in-frame exon in the 5' coding region compared to variant 1. It encodes isoform 2 which has the same N- and C- termini, but lacks a short internal segment compared to isoform 1.
- Source sequence(s)
-
AC114489, AL033529
- UniProtKB/TrEMBL
-
A8K0B5
- Related
- ENSP00000483675.2, ENST00000373506.8
- Conserved Domains (1) summary
-
- pfam01951
Location:47 → 172
- Archease; Archease protein family (MTH1598/TM1083)
-
NM_001308136.2 → NP_001295065.1 protein archease isoform 3
See identical proteins and their annotated locations for NP_001295065.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (3) lacks an exon in the 3' coding region, which results in a frameshift and an early stop codon, compared to variant 1. The encoded isoform (3) is shorter and has a distinct C-terminus, compared to isoform 1.
- Source sequence(s)
-
AC114489, AL033529
- UniProtKB/TrEMBL
-
H7C3R6
- Related
- ENSP00000413485.2, ENST00000436661.6
- Conserved Domains (1) summary
-
- pfam01951
Location:43 → 121
- Archease; Archease protein family (MTH1598/TM1083)
-
NM_001308137.2 → NP_001295066.1 protein archease isoform 4
Status: VALIDATED
- Description
- Transcript Variant: This variant (4) uses an alternate splice donor site in the 5' coding region, and lacks exons in the 5' and 3' coding regions, with the latter resulting in a frameshift and an early stop codon, compared to variant 1. The encoded isoform (4) contains two distinct amino acids near the N-terminus, lacks an internal segment, is shorter, and has a distinct C-terminus, compared to isoform 1.
- Source sequence(s)
-
AC114489, AL033529
- UniProtKB/TrEMBL
-
H7C3R6
- Conserved Domains (1) summary
-
- pfam01951
Location:47 → 114
- Archease; Archease protein family (MTH1598/TM1083)
-
NM_001308138.2 → NP_001295067.1 protein archease isoform 5
See identical proteins and their annotated locations for NP_001295067.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (5) has multiple differences in the coding region compared to variant 1. This variant represents translation initiation at a downstream start codon compared to variant 1; the 5'-most initiation codon, as used in variant 1, is associated with a truncated ORF that would render the transcript a candidate for nonsense-mediated decay (NMD). Leaky scanning may allow translation initiation at the downstream start codon to encode an isoform (5) that has a shorter N-terminus, compared to isoform 1. Variants 5, 6, 7, and 8 all encode the same isoform (5).
- Source sequence(s)
-
AC114489, AL033529
- Consensus CDS
-
CCDS76134.1
- UniProtKB/TrEMBL
- A0A087WXH6, A0A9K3Y7L1, D3DPQ2
- Related
- ENSP00000481039.1, ENST00000465588.2
- Conserved Domains (1) summary
-
- pfam01951
Location:1 → 110
- Archease; Archease protein family (MTH1598/TM1083)
-
NM_001308139.2 → NP_001295068.1 protein archease isoform 5
See identical proteins and their annotated locations for NP_001295068.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (6) uses an alternate splice acceptor site in the 5' coding region compared to variant 1. This variant represents translation initiation at a downstream start codon compared to variant 1; the 5'-most initiation codon, as used in variant 1, is associated with a truncated ORF that would render the transcript a candidate for nonsense-mediated decay (NMD). Leaky scanning may allow translation initiation at the downstream start codon to encode an isoform (5) that has a shorter N-terminus, compared to isoform 1. Variants 5, 6, 7, and 8 all encode the same isoform (5).
- Source sequence(s)
-
AC114489, AL033529
- Consensus CDS
-
CCDS76134.1
- UniProtKB/TrEMBL
- A0A087WXH6, A0A9K3Y7L1, D3DPQ2
- Conserved Domains (1) summary
-
- pfam01951
Location:1 → 110
- Archease; Archease protein family (MTH1598/TM1083)
-
NM_001308140.2 → NP_001295069.1 protein archease isoform 5
See identical proteins and their annotated locations for NP_001295069.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (7) uses an alternate splice donor site in the 5' coding region compared to variant 1. This variant represents translation initiation at a downstream start codon compared to variant 1; the 5'-most initiation codon, as used in variant 1, is associated with a truncated ORF that would render the transcript a candidate for nonsense-mediated decay (NMD). Leaky scanning may allow translation initiation at the downstream start codon to encode an isoform (5) that has a shorter N-terminus, compared to isoform 1. Variants 5, 6, 7, and 8 all encode the same isoform (5).
- Source sequence(s)
-
AC114489, AL033529
- Consensus CDS
-
CCDS76134.1
- UniProtKB/TrEMBL
- A0A087WXH6, A0A9K3Y7L1, D3DPQ2
- Conserved Domains (1) summary
-
- pfam01951
Location:1 → 110
- Archease; Archease protein family (MTH1598/TM1083)
-
NM_001308141.2 → NP_001295070.1 protein archease isoform 5
See identical proteins and their annotated locations for NP_001295070.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (8) uses an alternate splice donor site in the 5' coding region compared to variant 1. This variant represents translation initiation at a downstream start codon compared to variant 1; the 5'-most initiation codon, as used in variant 1, is associated with a truncated ORF that would render the transcript a candidate for nonsense-mediated decay (NMD). Leaky scanning may allow translation initiation at the downstream start codon to encode an isoform (5) that has a shorter N-terminus, compared to isoform 1. Variants 5, 6, 7, and 8 all encode the same isoform (5).
- Source sequence(s)
-
AC114489, AL033529
- Consensus CDS
-
CCDS76134.1
- UniProtKB/TrEMBL
- A0A087WXH6, A0A9K3Y7L1, D3DPQ2
- Conserved Domains (1) summary
-
- pfam01951
Location:1 → 110
- Archease; Archease protein family (MTH1598/TM1083)
-
NM_001330475.2 → NP_001317404.1 protein archease isoform 6
Status: VALIDATED
- Source sequence(s)
-
AC114489, AL033529
- Consensus CDS
-
CCDS81292.1
- UniProtKB/TrEMBL
-
A0A8C8MQ05
- Related
- ENSP00000362600.3, ENST00000373501.6
- Conserved Domains (1) summary
-
- pfam01951
Location:6 → 131
- Archease; Archease protein family (MTH1598/TM1083)
-
NM_001366255.1 → NP_001353184.1 protein archease isoform 6
Status: VALIDATED
- Source sequence(s)
-
AC114489, AL033529
- Consensus CDS
-
CCDS81292.1
- UniProtKB/TrEMBL
-
A0A8C8MQ05
- Conserved Domains (1) summary
-
- pfam01951
Location:6 → 131
- Archease; Archease protein family (MTH1598/TM1083)
-
NM_001366256.1 → NP_001353185.1 protein archease isoform 5
Status: VALIDATED
- Source sequence(s)
-
AC114489, AL033529
- Consensus CDS
-
CCDS76134.1
- UniProtKB/TrEMBL
- A0A087WXH6, A0A9K3Y7L1, D3DPQ2
- Conserved Domains (1) summary
-
- pfam01951
Location:1 → 110
- Archease; Archease protein family (MTH1598/TM1083)
-
NM_001366257.1 → NP_001353186.1 protein archease isoform 5
Status: VALIDATED
- Source sequence(s)
-
AC114489, AL033529, HY228209
- Consensus CDS
-
CCDS76134.1
- UniProtKB/TrEMBL
- A0A087WXH6, A0A9K3Y7L1, D3DPQ2
- Conserved Domains (1) summary
-
- pfam01951
Location:1 → 110
- Archease; Archease protein family (MTH1598/TM1083)
-
NM_001366258.1 → NP_001353187.1 protein archease isoform 5
Status: VALIDATED
- Source sequence(s)
-
AC114489, AL033529
- Consensus CDS
-
CCDS76134.1
- UniProtKB/TrEMBL
- A0A087WXH6, A0A9K3Y7L1, D3DPQ2
- Conserved Domains (1) summary
-
- pfam01951
Location:1 → 110
- Archease; Archease protein family (MTH1598/TM1083)
-
NM_001366259.1 → NP_001353188.1 protein archease isoform 5
Status: VALIDATED
- Source sequence(s)
-
AC114489, AL033529
- Consensus CDS
-
CCDS76134.1
- UniProtKB/TrEMBL
- A0A087WXH6, A0A9K3Y7L1, D3DPQ2
- Conserved Domains (1) summary
-
- pfam01951
Location:1 → 110
- Archease; Archease protein family (MTH1598/TM1083)
-
NM_001366260.1 → NP_001353189.1 protein archease isoform 5
Status: VALIDATED
- Source sequence(s)
-
AC114489, AL033529
- Consensus CDS
-
CCDS76134.1
- UniProtKB/TrEMBL
- A0A087WXH6, A0A9K3Y7L1, D3DPQ2
- Conserved Domains (1) summary
-
- pfam01951
Location:1 → 110
- Archease; Archease protein family (MTH1598/TM1083)
-
NM_001366263.1 → NP_001353192.1 protein archease isoform 5
Status: VALIDATED
- Source sequence(s)
-
AC114489, AL033529, CN344730
- Consensus CDS
-
CCDS76134.1
- UniProtKB/TrEMBL
- A0A087WXH6, A0A9K3Y7L1, D3DPQ2
- Conserved Domains (1) summary
-
- pfam01951
Location:1 → 110
- Archease; Archease protein family (MTH1598/TM1083)
-
NM_001366264.1 → NP_001353193.1 protein archease isoform 7
Status: VALIDATED
- Source sequence(s)
-
AC114489, AL033529, HY108987
- UniProtKB/TrEMBL
-
A8K0B5
- Conserved Domains (1) summary
-
- pfam01951
Location:43 → 191
- Archease; Archease protein family (MTH1598/TM1083)
-
NM_001366265.1 → NP_001353194.1 protein archease isoform 8
Status: VALIDATED
- Source sequence(s)
-
AC114489, AL033529, CB992352
- UniProtKB/TrEMBL
-
A8K0B5
- Conserved Domains (1) summary
-
- pfam01951
Location:43 → 152
- Archease; Archease protein family (MTH1598/TM1083)
-
NM_001366266.1 → NP_001353195.1 protein archease isoform 9
Status: VALIDATED
- Source sequence(s)
-
AC114489, AL033529, HY067040
- UniProtKB/TrEMBL
-
A8K0B5
- Conserved Domains (1) summary
-
- pfam01951
Location:43 → 149
- Archease; Archease protein family (MTH1598/TM1083)
-
NM_001366267.1 → NP_001353196.1 protein archease isoform 10
Status: VALIDATED
- Source sequence(s)
-
AC114489, AL033529
- Conserved Domains (1) summary
-
- pfam01951
Location:1 → 127
- Archease; Archease protein family (MTH1598/TM1083)
-
NM_001366268.1 → NP_001353197.1 protein archease isoform 11
Status: VALIDATED
- Source sequence(s)
-
AC114489, AL033529
- Conserved Domains (1) summary
-
- pfam01951
Location:1 → 122
- Archease; Archease protein family (MTH1598/TM1083)
-
NM_001366269.1 → NP_001353198.1 protein archease isoform 12
Status: VALIDATED
- Source sequence(s)
-
AC114489, AL033529
- Conserved Domains (1) summary
-
- pfam01951
Location:6 → 88
- Archease; Archease protein family (MTH1598/TM1083)
-
NM_001366270.1 → NP_001353199.1 protein archease isoform 13
Status: VALIDATED
- Source sequence(s)
-
AC114489, AL033529
- UniProtKB/TrEMBL
-
A0A087X1H4
- Related
- ENSP00000484207.2, ENST00000492007.6
- Conserved Domains (1) summary
-
- cl00606
Location:54 → 93
- Archease; Archease protein family (MTH1598/TM1083)
-
NM_001366271.1 → NP_001353200.1 protein archease isoform 14
Status: VALIDATED
- Source sequence(s)
-
AC114489, AL033529
- Conserved Domains (1) summary
-
- cl00606
Location:67 → 92
- Archease; Archease protein family (MTH1598/TM1083)
-
NM_178547.5 → NP_848642.2 protein archease isoform 1
Status: VALIDATED
- Description
- Transcript Variant: This variant (1) encodes the longest isoform (1).
- Source sequence(s)
-
AL033529, AY151084
- Consensus CDS
-
CCDS365.2
- UniProtKB/Swiss-Prot
- Q5TGK5, Q6PDA1, Q8IWS9, Q8IWT0, Q8NEV6, Q8NEV7
- UniProtKB/TrEMBL
-
A0A087X0V4
- Related
- ENSP00000417677.2, ENST00000468695.6
- Conserved Domains (1) summary
-
- pfam01951
Location:31 → 167
- Archease; Archease protein family (MTH1598/TM1083)
RNA
-
NR_158772.1 RNA Sequence
Status: VALIDATED
- Source sequence(s)
-
AC114489, AL033529
-
NR_158773.1 RNA Sequence
Status: VALIDATED
- Source sequence(s)
-
AC114489, AL033529
-
NR_158774.1 RNA Sequence
Status: VALIDATED
- Source sequence(s)
-
AC114489, AL033529
-
NR_158775.1 RNA Sequence
Status: VALIDATED
- Source sequence(s)
-
AC114489, AL033529
-
NR_158776.1 RNA Sequence
Status: VALIDATED
- Source sequence(s)
-
AC114489, AL033529
-
NR_158777.1 RNA Sequence
Status: VALIDATED
- Source sequence(s)
-
AC114489, AL033529
-
NR_158778.1 RNA Sequence
Status: VALIDATED
- Source sequence(s)
-
AC114489, AL033529
-
NR_158779.1 RNA Sequence
Status: VALIDATED
- Source sequence(s)
-
AC114489, AL033529
-
NR_158780.1 RNA Sequence
Status: VALIDATED
- Source sequence(s)
-
AC114489, AL033529
-
NR_158781.1 RNA Sequence
Status: VALIDATED
- Source sequence(s)
-
AA927666, AC114489, AL033529
-
NR_158782.1 RNA Sequence
Status: VALIDATED
- Source sequence(s)
-
AC114489, AL033529, CK819207
The following Reference Sequences have been suppressed. Explain
These RefSeqs were suppressed for the
cited reason(s). Suppressed RefSeqs do not appear in BLAST databases, related
sequence links, or BLAST links (BLink), but may still be retrieved by clicking on
their accession.version below.
-
NM_001366278.1: Suppressed sequence
- Description
- NM_001366278.1: This RefSeq was removed because it is redundant with an existing RefSeq.