NEW
Try the new Transcript table
These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001261401.2 → NP_001248330.1 translin isoform 2
See identical proteins and their annotated locations for NP_001248330.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (2) lacks an exon in the 3' coding region, compared to variant 1, which results in a frameshift and a protein (isoform 2) with a shorter and distinct C-terminus, compared to isoform 1.
- Source sequence(s)
-
AK091915, AK296469, AL122099, DA772798
- Consensus CDS
-
CCDS58723.1
- UniProtKB/Swiss-Prot
-
Q15631
- UniProtKB/TrEMBL
-
B3KRM8
- Related
- ENSP00000437728.1, ENST00000536142.5
- Conserved Domains (1) summary
-
- cl00957
Location:10 → 126
- Translin-like; Translin and translin-associated factor-X (TRAX)
-
NM_004622.3 → NP_004613.1 translin isoform 1
See identical proteins and their annotated locations for NP_004613.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (1) represents the longest transcript and encodes the longer isoform (1).
- Source sequence(s)
-
AC018737
- Consensus CDS
-
CCDS33284.1
- UniProtKB/Swiss-Prot
- B7Z3X8, Q15631, Q5U0K7
- UniProtKB/TrEMBL
-
Q53GR3
- Related
- ENSP00000374332.3, ENST00000389682.8
- Conserved Domains (1) summary
-
- cd14819
Location:10 → 216
- Translin; also known as TB-RBP (testis brain RNA-binding protein)
RNA
-
NR_048556.2 RNA Sequence
Status: REVIEWED
- Description
- Transcript Variant: This variant (3) lacks an exon in the 5' coding region, compared to variant 1, which results in a frameshift and early stop codon. The transcript is sufficiently abundant to represent as a RefSeq record; however, the predicted protein is not represented because the product is significantly truncated and the transcript is a candidate for nonsense-mediated mRNA decay (NMD).
- Source sequence(s)
-
AK091915, AL122099, DA523145, DA772798
-
NR_048557.2 RNA Sequence
Status: REVIEWED
- Description
- Transcript Variant: This variant (4) lacks multiple exons in the 5' coding region, compared to variant 1, which results in a frameshift and early stop codon. The transcript is sufficiently abundant to represent as a RefSeq record; however, the predicted protein is not represented because the product is significantly truncated and the transcript is a candidate for nonsense-mediated mRNA decay (NMD).
- Source sequence(s)
-
AK091915, AL122099, BP289175, DA772798
-
NR_048558.2 RNA Sequence
Status: REVIEWED
- Description
- Transcript Variant: This variant (5) lacks multiple exons in the 5' coding region, compared to variant 1, which results in a frameshift and early stop codon. The transcript is sufficiently abundant to represent as a RefSeq record; however, the predicted protein is not represented because the product is significantly truncated and the transcript is a candidate for nonsense-mediated mRNA decay (NMD).
- Source sequence(s)
-
AK091915, AK311410, AL122099, DA772798
-
NR_048559.2 RNA Sequence
Status: REVIEWED
- Description
- Transcript Variant: This variant (6) lacks multiple exons and contains an additional segment in the 5' coding region, compared to variant 1, which results in a frameshift and early stop codon. The transcript is sufficiently abundant to represent as a RefSeq record; however, the predicted protein is not represented because the product is significantly truncated and the transcript is a candidate for nonsense-mediated mRNA decay (NMD).
- Source sequence(s)
-
AK091915, AL122099, BP309328, DA772798
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCh38.p14 Primary Assembly
Genomic
-
NC_000002.12 Reference GRCh38.p14 Primary Assembly
- Range
-
121755651..121767853
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
Alternate T2T-CHM13v2.0
Genomic
-
NC_060926.1 Alternate T2T-CHM13v2.0
- Range
-
122190928..122203130
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)