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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_000889.3 → NP_000880.1 integrin beta-7 isoform a precursor
See identical proteins and their annotated locations for NP_000880.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (1) encodes the longest isoform (a). Variants 1 and 3-8 all encode the same isoform (a).
- Source sequence(s)
-
DC296007, S80335
- Consensus CDS
-
CCDS8849.1
- UniProtKB/Swiss-Prot
- P26010, Q9UCP7, Q9UCS7
- Related
- ENSP00000267082.4, ENST00000267082.10
- Conserved Domains (5) summary
-
- smart00187
Location:50 → 476
- INB; Integrin beta subunits (N-terminal portion of extracellular region)
- pfam07965
Location:645 → 717
- Integrin_B_tail; Integrin beta tail domain
- pfam07974
Location:607 → 635
- EGF_2; EGF-like domain
- pfam08725
Location:750 → 791
- Integrin_b_cyt; Integrin beta cytoplasmic domain
- pfam12785
Location:537 → 645
- VESA1_N; Variant erythrocyte surface antigen-1
-
NM_001414156.1 → NP_001401085.1 integrin beta-7 isoform a precursor
Status: REVIEWED
- Source sequence(s)
-
AC073573
- UniProtKB/Swiss-Prot
- P26010, Q9UCP7, Q9UCS7
-
NM_001414157.1 → NP_001401086.1 integrin beta-7 isoform a precursor
Status: REVIEWED
- Source sequence(s)
-
AC073573
- UniProtKB/Swiss-Prot
- P26010, Q9UCP7, Q9UCS7
-
NM_001414158.1 → NP_001401087.1 integrin beta-7 isoform a precursor
Status: REVIEWED
- Source sequence(s)
-
AC073573
- UniProtKB/Swiss-Prot
- P26010, Q9UCP7, Q9UCS7
- Related
- ENSP00000408741.3, ENST00000422257.7
-
NM_001414159.1 → NP_001401088.1 integrin beta-7 isoform a precursor
Status: REVIEWED
- Source sequence(s)
-
AC073573
- UniProtKB/Swiss-Prot
- P26010, Q9UCP7, Q9UCS7
-
NM_001414160.1 → NP_001401089.1 integrin beta-7 isoform a precursor
Status: REVIEWED
- Source sequence(s)
-
AC073573
- UniProtKB/Swiss-Prot
- P26010, Q9UCP7, Q9UCS7
-
NM_001414161.1 → NP_001401090.1 integrin beta-7 isoform a precursor
Status: REVIEWED
- Source sequence(s)
-
AC073573
- UniProtKB/Swiss-Prot
- P26010, Q9UCP7, Q9UCS7
-
NM_001414162.1 → NP_001401091.1 integrin beta-7 isoform b precursor
Status: REVIEWED
- Source sequence(s)
-
AC073573
-
NM_001414163.1 → NP_001401092.1 integrin beta-7 isoform b precursor
Status: REVIEWED
- Source sequence(s)
-
AC073573
-
NM_001414164.1 → NP_001401093.1 integrin beta-7 isoform b precursor
Status: REVIEWED
- Source sequence(s)
-
AC073573
-
NM_001414165.1 → NP_001401094.1 integrin beta-7 isoform c precursor
Status: REVIEWED
- Source sequence(s)
-
AC073573
-
NM_001414166.1 → NP_001401095.1 integrin beta-7 isoform c precursor
Status: REVIEWED
- Source sequence(s)
-
AC073573
-
NM_001414167.1 → NP_001401096.1 integrin beta-7 isoform c precursor
Status: REVIEWED
- Source sequence(s)
-
AC073573
-
NM_001414169.1 → NP_001401098.1 integrin beta-7 isoform d precursor
Status: REVIEWED
- Source sequence(s)
-
AC073573
-
NM_001414170.1 → NP_001401099.1 integrin beta-7 isoform d precursor
Status: REVIEWED
- Source sequence(s)
-
AC073573
-
NM_001414171.1 → NP_001401100.1 integrin beta-7 isoform d precursor
Status: REVIEWED
- Source sequence(s)
-
AC073573
-
NM_001414172.1 → NP_001401101.1 integrin beta-7 isoform d precursor
Status: REVIEWED
- Source sequence(s)
-
AC073573
- Related
- ENSP00000455374.2, ENST00000550743.6
-
NM_001414173.1 → NP_001401102.1 integrin beta-7 isoform e
Status: REVIEWED
- Source sequence(s)
-
AC073573
RNA
-
NR_104181.2 RNA Sequence
Status: REVIEWED
- Description
- Transcript Variant: This variant (2) lacks one alternate 5' exon and three alternate 3' exons compared to variant 1. This variant is represented as non-coding because the use of the 5'-most translational start codon, as used in variant 1, renders the transcript a candidate for nonsense-mediated mRNA decay (NMD).
- Source sequence(s)
-
AC073573, AI804573, AK300960
- Related
-
ENST00000542497.5
-
NR_182253.1 RNA Sequence
Status: REVIEWED
- Source sequence(s)
-
AC073573
-
NR_182254.1 RNA Sequence
Status: REVIEWED
- Source sequence(s)
-
AC073573
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCh38.p14 Primary Assembly
Genomic
-
NC_000012.12 Reference GRCh38.p14 Primary Assembly
- Range
-
53191323..53207251 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
Alternate T2T-CHM13v2.0
Genomic
-
NC_060936.1 Alternate T2T-CHM13v2.0
- Range
-
53156921..53172850 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)