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    FAM228A family with sequence similarity 228 member A [ Homo sapiens (human) ]

    Gene ID: 653140, updated on 19-Sep-2024

    Summary

    Official Symbol
    FAM228Aprovided by HGNC
    Official Full Name
    family with sequence similarity 228 member Aprovided by HGNC
    Primary source
    HGNC:HGNC:34418
    See related
    Ensembl:ENSG00000186453 AllianceGenome:HGNC:34418
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Also known as
    C2orf84
    Expression
    Biased expression in testis (RPKM 10.6) and fat (RPKM 1.0) See more
    Orthologs
    NEW
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    Genomic context

    See FAM228A in Genome Data Viewer
    Location:
    2p23.3
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 2 NC_000002.12 (24175053..24191698)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 2 NC_060926.1 (24209749..24226392)
    RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 2 NC_000002.11 (24397922..24414567)

    Chromosome 2 - NC_000002.12Genomic Context describing neighboring genes Neighboring gene family with sequence similarity 228 member B Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 11228 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 15427 Neighboring gene profilin family member 4 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 15428 Neighboring gene uncharacterized LOC105374328 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 15429 Neighboring gene intersectin 2 Neighboring gene BRD4-independent group 4 enhancer GRCh37_chr2:24475575-24476774 Neighboring gene small Cajal body-specific RNA 21 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 15430 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 15431 Neighboring gene high mobility group nucleosomal binding domain 2 pseudogene 20

    Genomic regions, transcripts, and products

    Expression

    • Project title: HPA RNA-seq normal tissues HPA RNA-seq normal tissues
    • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
    • BioProject: PRJEB4337
    • Publication: PMID 24309898
    • Analysis date: Wed Apr 4 07:08:55 2018

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General protein information

    Preferred Names
    protein FAM228A
    Names
    UPF0638 protein C2orf84

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001040710.3NP_001035800.1  protein FAM228A

      See identical proteins and their annotated locations for NP_001035800.1

      Status: VALIDATED

      Source sequence(s)
      AC008073, BC050462, HY022970
      Consensus CDS
      CCDS42659.1
      UniProtKB/Swiss-Prot
      Q86W67
      Related
      ENSP00000295150.3, ENST00000295150.8

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000002.12 Reference GRCh38.p14 Primary Assembly

      Range
      24175053..24191698
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060926.1 Alternate T2T-CHM13v2.0

      Range
      24209749..24226392
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)