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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
Genomic
-
NG_029059.1 RefSeqGene
- Range
-
4989..63929
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
NM_001135044.2 → NP_001128516.1 mitogen-activated protein kinase 9 isoform JNK2 gamma
See identical proteins and their annotated locations for NP_001128516.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (JNK2-g) differs in the 3' UTR and coding sequence compared to variant JNK2-b2. The resulting isoform (JNK2 gamma) has a shorter and distinct C-terminus compared to isoform JNK2 beta2. Variants JNK2-g and 10 both encode the same isoform (JNK2 gamma).
- Source sequence(s)
-
AC008610, AC104115, DB451562, EU927388, U35002
- Consensus CDS
-
CCDS47356.1
- UniProtKB/Swiss-Prot
-
P45984
- Related
- ENSP00000397422.2, ENST00000425491.6
- Conserved Domains (1) summary
-
- cl21453
Location:25 → 231
- PKc_like; Protein Kinases, catalytic domain
-
NM_001308244.1 → NP_001295173.1 mitogen-activated protein kinase 9 isoform gamma2
See identical proteins and their annotated locations for NP_001295173.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (JNK2-g2) lacks several 3' exons but contains alternate 3' exon structure, and it thus differs in the 3' coding region and 3' UTR, compared to variant JNK2-b2. The encoded isoform (gamma2) has a distinct C-terminus and is shorter than isoform beta2. The 5' UTR of this variant is incomplete due to a lack of 5'-complete transcript support for this variant.
- Source sequence(s)
-
AK289638, BF056535, CX758487, HM036706
- Consensus CDS
-
CCDS78103.1
- UniProtKB/TrEMBL
-
D7R525
- Related
- ENSP00000443149.1, ENST00000539014.5
- Conserved Domains (1) summary
-
- cl21453
Location:25 → 205
- PKc_like; Protein Kinases, catalytic domain
-
NM_001364607.2 → NP_001351536.1 mitogen-activated protein kinase 9 isoform alpha1
Status: REVIEWED
- Description
- Transcript Variant: This variant (7), as well as variant JNK2-a1, encodes isoform alpha1.
- Source sequence(s)
-
AC008610, AC104115
- Consensus CDS
-
CCDS43409.1
- UniProtKB/TrEMBL
-
D7R526
- Conserved Domains (1) summary
-
- cd07850
Location:25 → 360
- STKc_JNK; Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase
-
NM_001364608.2 → NP_001351537.1 mitogen-activated protein kinase 9 isoform alpha2
Status: REVIEWED
- Description
- Transcript Variant: This variant (8), as well as variant JNK2-a2, encodes isoform alpha2.
- Source sequence(s)
-
AC008610, AC104115
- Consensus CDS
-
CCDS4453.1
- UniProtKB/Swiss-Prot
- A8K0S3, B5BU66, B5M0B4, D3DWQ8, D3DWQ9, P45984, Q15708, Q15710, Q15711, Q8N5C5
- UniProtKB/TrEMBL
-
B5BUJ7
- Conserved Domains (1) summary
-
- cd07850
Location:25 → 360
- STKc_JNK; Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase
-
NM_001364609.2 → NP_001351538.1 mitogen-activated protein kinase 9 isoform beta2
Status: REVIEWED
- Description
- Transcript Variant: This variant (9), as well as variant JNK2-b2, encodes isoform beta2.
- Source sequence(s)
-
AC008610, AC104115
- Consensus CDS
-
CCDS4454.1
- UniProtKB/TrEMBL
-
B5BUJ7
- Conserved Domains (1) summary
-
- cd07850
Location:25 → 360
- STKc_JNK; Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase
-
NM_001364610.2 → NP_001351539.1 mitogen-activated protein kinase 9 isoform JNK2 gamma
Status: REVIEWED
- Description
- Transcript Variant: This variant (10), as well as variant JNK2-g, encodes isoform JNK2 gamma.
- Source sequence(s)
-
AC008610, AC104115
- Consensus CDS
-
CCDS47356.1
- Conserved Domains (1) summary
-
- cl21453
Location:25 → 231
- PKc_like; Protein Kinases, catalytic domain
-
NM_001364611.2 → NP_001351540.1 mitogen-activated protein kinase 9 isoform 11
Status: REVIEWED
- Description
- Transcript Variant: This variant (11), as well as variant 12, encodes isoform 11.
- Source sequence(s)
-
AC008610, AC104115
- UniProtKB/TrEMBL
-
B5BUJ7
- Conserved Domains (1) summary
-
- cd07850
Location:18 → 334
- STKc_JNK; Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase
-
NM_001364612.2 → NP_001351541.1 mitogen-activated protein kinase 9 isoform 11
Status: REVIEWED
- Description
- Transcript Variant: This variant (12), as well as variant 11, encodes isoform 11.
- Source sequence(s)
-
AC008610, AC104115
- UniProtKB/TrEMBL
-
B5BUJ7
- Conserved Domains (1) summary
-
- cd07850
Location:18 → 334
- STKc_JNK; Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase
-
NM_001364613.2 → NP_001351542.1 mitogen-activated protein kinase 9 isoform 12
Status: REVIEWED
- Source sequence(s)
-
AC008610, AC104115
- UniProtKB/TrEMBL
-
B5BUJ7
- Conserved Domains (1) summary
-
- cd07850
Location:18 → 334
- STKc_JNK; Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase
-
NM_002752.5 → NP_002743.3 mitogen-activated protein kinase 9 isoform alpha2
See identical proteins and their annotated locations for NP_002743.3
Status: REVIEWED
- Description
- Transcript Variant: This variant (JNK2-a2) encodes the longer of the two JNK2 alpha isoforms (JNK2 alpha2). The JNK2-a2 variant differs from the JNK2-b2 variant in the use of an alternate internal coding exon of the same length. Thus, JNK2 alpha2 isoform is the same length as JNK2 beta2 isoform, with a few aa differences in an internal protein segment. Variants JNK2-a2 and 8 both encode the same isoform (alpha2).
- Source sequence(s)
-
AC008610, AC104115, BC032539, DB451562
- Consensus CDS
-
CCDS4453.1
- UniProtKB/Swiss-Prot
- A8K0S3, B5BU66, B5M0B4, D3DWQ8, D3DWQ9, P45984, Q15708, Q15710, Q15711, Q8N5C5
- UniProtKB/TrEMBL
-
B5BUJ7
- Related
- ENSP00000394560.2, ENST00000452135.7
- Conserved Domains (1) summary
-
- cd07850
Location:25 → 360
- STKc_JNK; Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase
-
NM_139068.3 → NP_620707.1 mitogen-activated protein kinase 9 isoform alpha1
See identical proteins and their annotated locations for NP_620707.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (JNK2-a1) uses a different acceptor splice site in the last coding exon compared to transcript variant JNK2-a2, resulting in a frameshift and a shorter isoform (JNK2 alpha1) with a different C-terminus, compared to isoform JNK2 alpha2. The JNK2-a1 variant differs from the JNK2-b1 variant in the use of an alternate internal coding exon of the same length. Thus, JNK2 alpha1 isoform is the same length as JNK2 beta1 isoform, with a few aa differences in an internal protein segment. Variants JNK2-a1 and 7 both encode the same isoform (alpha1).
- Source sequence(s)
-
AC008610, AC104115, DB451562, U34821
- Consensus CDS
-
CCDS43409.1
- UniProtKB/TrEMBL
-
D7R526
- Related
- ENSP00000377028.3, ENST00000393360.7
- Conserved Domains (1) summary
-
- cd07850
Location:25 → 360
- STKc_JNK; Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase
-
NM_139069.3 → NP_620708.1 mitogen-activated protein kinase 9 isoform beta1
See identical proteins and their annotated locations for NP_620708.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (JNK2-b1) uses a different acceptor splice site in the last coding exon compared to transcript variant JNK2-b2, resulting in a frameshift and a shorter isoform (JNK2 beta1) with a different C-terminus, compared to isoform JNK2 beta2. The JNK2-b1 variant differs from the JNK2-a1 variant in the use of an alternate internal coding exon of the same length. Thus, JNK2 beta1 isoform is the same length as JNK2 alpha1 isoform, with a few aa differences in an internal protein segment.
- Source sequence(s)
-
AC008610, AC104115, AK289638, DB451562, U35002
- Consensus CDS
-
CCDS43410.1
- UniProtKB/TrEMBL
-
D7R527
- Related
- ENSP00000345524.6, ENST00000343111.10
- Conserved Domains (1) summary
-
- cd07850
Location:25 → 360
- STKc_JNK; Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase
-
NM_139070.3 → NP_620709.1 mitogen-activated protein kinase 9 isoform beta2
See identical proteins and their annotated locations for NP_620709.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (JNK2-b2) encodes the longer of the two JNK2 beta isoforms (JNK2 beta2). The JNK2-b2 variant differs from the JNK2-a2 variant in the use of an alternate internal coding exon of the same length. Thus, JNK2 beta2 isoform is the same length as JNK2 alpha2 isoform, with a few aa differences in an internal protein segment. Variants JNK-b2 and 9 both encode the same isoform (beta2).
- Source sequence(s)
-
AC008610, AC104115, AK289638, DB451562
- Consensus CDS
-
CCDS4454.1
- UniProtKB/TrEMBL
-
B5BUJ7
- Related
- ENSP00000389338.1, ENST00000455781.5
- Conserved Domains (1) summary
-
- cd07850
Location:25 → 360
- STKc_JNK; Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCh38.p14 Primary Assembly
Genomic
-
NC_000005.10 Reference GRCh38.p14 Primary Assembly
- Range
-
180233143..180292083 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_047417387.1 → XP_047273343.1 mitogen-activated protein kinase 9 isoform X1
-
XM_017009643.2 → XP_016865132.1 mitogen-activated protein kinase 9 isoform X2
- UniProtKB/TrEMBL
-
D7R525
- Conserved Domains (1) summary
-
- cl21453
Location:25 → 205
- PKc_like; Protein Kinases, catalytic domain
Alternate T2T-CHM13v2.0
Genomic
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NC_060929.1 Alternate T2T-CHM13v2.0
- Range
-
180788589..180847539 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_054352934.1 → XP_054208909.1 mitogen-activated protein kinase 9 isoform X1
-
XM_054352935.1 → XP_054208910.1 mitogen-activated protein kinase 9 isoform X2
- UniProtKB/TrEMBL
-
D7R525