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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001286568.2 → NP_001273497.1 DNA annealing helicase and endonuclease ZRANB3 isoform 2
See identical proteins and their annotated locations for NP_001273497.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (2) differs in the 5' UTR and uses an alternate splice site in the central coding region compared to variant 1. The encoded isoform (2) is shorter than isoform 1.
- Source sequence(s)
-
AC017031, AI670931, BX647838
- Consensus CDS
-
CCDS67963.1
- UniProtKB/Swiss-Prot
-
Q5FWF4
- Related
- ENSP00000383979.1, ENST00000401392.5
- Conserved Domains (6) summary
-
- cd00046
Location:55 → 190
- DEXDc; DEAD-like helicases superfamily. A diverse family of proteins involved in ATP-dependent RNA or DNA unwinding. This domain contains the ATP-binding region.
- cd00085
Location:1009 → 1047
- HNHc; HNH nucleases; HNH endonuclease signature which is found in viral, prokaryotic, and eukaryotic proteins. The alignment includes members of the large group of homing endonucleases, yeast intron 1 protein, MutS, as well as bacterial colicins, pyocins, and ...
- sd00029
Location:625 → 644
- zf-RanBP2; RanBP2-type Zn finger [structural motif]
- pfam00176
Location:40 → 316
- SNF2_N; SNF2 family N-terminal domain
- pfam00271
Location:330 → 435
- Helicase_C; Helicase conserved C-terminal domain
- pfam00641
Location:625 → 647
- zf-RanBP; Zn-finger in Ran binding protein and others
-
NM_001286569.1 → NP_001273498.1 DNA annealing helicase and endonuclease ZRANB3 isoform 3
See identical proteins and their annotated locations for NP_001273498.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (3) differs in the 5' UTR which results in the use of a downstream start codon compared to variant 1. The encoded isoform (3) has a shorter N-terminus compared to isoform 1.
- Source sequence(s)
-
AC016742, AC017031, AC064850, AI670931, AL833322
- Consensus CDS
-
CCDS74580.1
- UniProtKB/TrEMBL
-
F5GYN7
- Related
- ENSP00000441320.2, ENST00000536680.5
- Conserved Domains (3) summary
-
- cd00085
Location:557 → 595
- HNHc; HNH nucleases; HNH endonuclease signature which is found in viral, prokaryotic, and eukaryotic proteins. The alignment includes members of the large group of homing endonucleases, yeast intron 1 protein, MutS, as well as bacterial colicins, pyocins, and ...
- sd00029
Location:171 → 190
- zf-RanBP2; RanBP2-type Zn finger [structural motif]
- pfam00641
Location:171 → 193
- zf-RanBP; Zn-finger in Ran binding protein and others
-
NM_032143.4 → NP_115519.2 DNA annealing helicase and endonuclease ZRANB3 isoform 1
See identical proteins and their annotated locations for NP_115519.2
Status: VALIDATED
- Description
- Transcript Variant: This variant (1) encodes the longest isoform 1.
- Source sequence(s)
-
AC017031, AI670931, BC089429
- Consensus CDS
-
CCDS46419.1
- UniProtKB/Swiss-Prot
- B3KYA1, B4E375, B5MDI3, D3DP76, E9PBP0, Q53SM1, Q5FWF4, Q6P2C4, Q8N1P4, Q9H0E8
- Related
- ENSP00000264159.6, ENST00000264159.11
- Conserved Domains (6) summary
-
- cd00046
Location:55 → 190
- DEXDc; DEAD-like helicases superfamily. A diverse family of proteins involved in ATP-dependent RNA or DNA unwinding. This domain contains the ATP-binding region.
- cd00085
Location:1011 → 1049
- HNHc; HNH nucleases; HNH endonuclease signature which is found in viral, prokaryotic, and eukaryotic proteins. The alignment includes members of the large group of homing endonucleases, yeast intron 1 protein, MutS, as well as bacterial colicins, pyocins, and ...
- sd00029
Location:625 → 644
- zf-RanBP2; RanBP2-type Zn finger [structural motif]
- pfam00176
Location:40 → 316
- SNF2_N; SNF2 family N-terminal domain
- pfam00271
Location:330 → 435
- Helicase_C; Helicase conserved C-terminal domain
- pfam00641
Location:625 → 647
- zf-RanBP; Zn-finger in Ran binding protein and others
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCh38.p14 Primary Assembly
Genomic
-
NC_000002.12 Reference GRCh38.p14 Primary Assembly
- Range
-
135196969..135531218 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
Alternate T2T-CHM13v2.0
Genomic
-
NC_060926.1 Alternate T2T-CHM13v2.0
- Range
-
135637447..135971741 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)