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    C7h19orf25 similar to human chromosome 19 open reading frame 25 [ Rattus norvegicus (Norway rat) ]

    Gene ID: 299612, updated on 2-Nov-2024

    Summary

    Official Symbol
    C7h19orf25provided by RGD
    Official Full Name
    similar to human chromosome 19 open reading frame 25provided by RGD
    Primary source
    RGD:1359127
    See related
    EnsemblRapid:ENSRNOG00000079774 AllianceGenome:RGD:1359127
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Rattus norvegicus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
    Also known as
    RGD1359127
    Summary
    Orthologous to human C19orf25 (chromosome 19 open reading frame 25). [provided by Alliance of Genome Resources, Nov 2024]
    Expression
    Biased expression in Adrenal (RPKM 122.3), Kidney (RPKM 90.3) and 9 other tissues See more
    Orthologs
    NEW
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    Genomic context

    See C7h19orf25 in Genome Data Viewer
    Location:
    7q11
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCr8 (GCF_036323735.1) 7 NC_086025.1 (10040929..10043057)
    RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 7 NC_051342.1 (9390255..9392383)
    106 previous assembly Rnor_6.0 (GCF_000001895.5) 7 NC_005106.4 (12256387..12258515)

    Chromosome 7 - NC_086025.1Genomic Context describing neighboring genes Neighboring gene receptor accessory protein 6 Neighboring gene uncharacterized LOC108351405 Neighboring gene proprotein convertase subtilisin/kexin type 4 Neighboring gene APC regulator of WNT signaling pathway 2 Neighboring gene ribosomal protein S15 Neighboring gene DAZ associated protein 1

    Genomic regions, transcripts, and products

    Expression

    • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
    • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
    • BioProject: PRJNA238328
    • Publication: PMID 24510058
    • Analysis date: Mon Jun 6 17:44:12 2016

    General protein information

    Preferred Names
    UPF0449 protein C19orf25 homolog

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001007657.1NP_001007658.1  UPF0449 protein C19orf25 homolog

      See identical proteins and their annotated locations for NP_001007658.1

      Status: PROVISIONAL

      Source sequence(s)
      BC079167
      UniProtKB/Swiss-Prot
      Q6AY72
      Related
      ENSRNOP00000110080.1, ENSRNOT00000128648.1
      Conserved Domains (1) summary
      pfam15136
      Location:6103
      UPF0449; Uncharacterized protein family UPF0449

    RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCr8

    Genomic

    1. NC_086025.1 Reference GRCr8

      Range
      10040929..10043057
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)