Sult1c3 sulfotransferase family 1C member 3 [Rattus norvegicus (Norway rat)] - Gene

Summary

Symbol: Sult1c3provided by RGD
Full Name: sulfotransferase family 1C member 3provided by RGD
Primary source: RGD:3768
See related: EnsemblRapid:ENSRNOG00000011269 AllianceGenome:RGD:3768
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Rattus norvegicus
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Also known as: Stp2; St1c1; HAST-I; Sult1a2; Sult1c1
Summary: Enables aryl sulfotransferase activity. Predicted to be involved in several processes, including 3'-phosphoadenosine 5'-phosphosulfate metabolic process; cholesterol metabolic process; and sulfation. Predicted to act upstream of or within sulfur compound metabolic process. Predicted to be active in cytoplasm. Orthologous to human SULT1C3 (sulfotransferase family 1C member 3). [provided by Alliance of Genome Resources, Nov 2024]
Expression: Restricted expression toward (RPKM 1183.2) See more
Orthologs: human all
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Genomic context

Location:: 9q11

Exon count:: 9

Annotation release	Status	Assembly	Chr	Location
RS_2024_02	current	GRCr8 (GCF_036323735.1)	9	NC_086027.1 (7548839..7594299, complement)
RS_2023_06	previous assembly	mRatBN7.2 (GCF_015227675.2)	9	NC_051344.1 (7221580..7266991, complement)
106	previous assembly	Rnor_6.0 (GCF_000001895.5)	9	NC_005108.4 (4931038..4978847, complement)

Chromosome 9 - NC_086027.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

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Expression

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See details

Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
BioProject: PRJNA238328
Publication: PMID 24510058
Analysis date: Mon Jun 6 17:44:12 2016

Bibliography

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GeneRIFs: Gene References Into Functions

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General gene information

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Gene Ontology Provided by RGD

Function	Evidence Code	Pubs
enables 3'-phosphoadenosine 5'-phosphosulfate binding	ISO Inferred from Sequence Orthology more info
enables alcohol sulfotransferase activity	ISO Inferred from Sequence Orthology more info
enables aryl sulfotransferase activity	IBA Inferred from Biological aspect of Ancestor more info
enables aryl sulfotransferase activity	IDA Inferred from Direct Assay more info	PubMed
enables aryl sulfotransferase activity	IEA Inferred from Electronic Annotation more info
enables aryl sulfotransferase activity	ISO Inferred from Sequence Orthology more info
enables bile-salt sulfotransferase activity	ISO Inferred from Sequence Orthology more info

Process	Evidence Code	Pubs
involved_in 3'-phosphoadenosine 5'-phosphosulfate metabolic process	ISO Inferred from Sequence Orthology more info
involved_in cholesterol metabolic process	ISO Inferred from Sequence Orthology more info
involved_in sulfation	IBA Inferred from Biological aspect of Ancestor more info
involved_in sulfur compound metabolic process	IEA Inferred from Electronic Annotation more info
acts_upstream_of_or_within sulfur compound metabolic process	ISO Inferred from Sequence Orthology more info
involved_in sulfur compound metabolic process	ISO Inferred from Sequence Orthology more info
involved_in xenobiotic metabolic process	ISO Inferred from Sequence Orthology more info

Component	Evidence Code	Pubs
is_active_in cytoplasm	IBA Inferred from Biological aspect of Ancestor more info
located_in cytoplasm	IEA Inferred from Electronic Annotation more info
located_in cytoplasm	ISO Inferred from Sequence Orthology more info

General protein information

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Preferred Names: sulfotransferase 1C1

Names: N-hydroxyarylamine sulfotransferase; N-hydroxylarylamine sulfotransferase; Phenol sulfotransferase 1c1; sulfotransferase 1C1-like; sulfotransferase family 1A, member 2; sulfotransferase family 1A, phenol-preferring, member 2; sulfotransferase family, cytosolic, 1C, member 1; sulfotransferase family, cytosolic, 1C, member 3; sulfotransferase, phenol preferring 2; sulphotransferase family cytosolic 1A phenol-preferring member 2

NP_113920.2

EC 2.8.2.-

XP_063123775.1

EC 2.8.2.-

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.