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    Mapk1ip1 mitogen-activated protein kinase 1 interacting protein 1 [ Rattus norvegicus (Norway rat) ]

    Gene ID: 499280, updated on 2-Nov-2024

    Summary

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    Official Symbol
    Mapk1ip1provided by RGD
    Official Full Name
    mitogen-activated protein kinase 1 interacting protein 1provided by RGD
    Primary source
    RGD:1565431
    See related
    EnsemblRapid:ENSRNOG00000016935 AllianceGenome:RGD:1565431
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Rattus norvegicus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
    Also known as
    RGD1565431
    Summary
    Predicted to enable identical protein binding activity. [provided by Alliance of Genome Resources, Nov 2024]
    Expression
    Biased expression in Thymus (RPKM 96.8), Adrenal (RPKM 82.0) and 9 other tissues See more
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    Genomic context

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    See Mapk1ip1 in Genome Data Viewer
    Location:
    1q41
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCr8 (GCF_036323735.1) 1 NC_086019.1 (203084938..203095455, complement)
    RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 1 NC_051336.1 (193655319..193665817, complement)
    106 previous assembly Rnor_6.0 (GCF_000001895.5) 1 NC_005100.4 (211195440..211205772, complement)

    Chromosome 1 - NC_086019.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC120099951 Neighboring gene transcription elongation regulator 1-like Neighboring gene uncharacterized LOC134485191 Neighboring gene protein phosphatase 2, regulatory subunit B, delta Neighboring gene BCL2 interacting protein 3

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
    • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
    • BioProject: PRJNA238328
    • Publication: PMID 24510058
    • Analysis date: Mon Jun 6 17:44:12 2016

    Bibliography

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    Related articles in PubMed

    1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RGD

    Function Evidence Code Pubs
    enables identical protein binding IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    MAPK-interacting and spindle-stabilizing protein

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001419503.1 → NP_001406432.1  MAPK-interacting and spindle-stabilizing protein

      Status: VALIDATED

      Source sequence(s)
      JAXUCZ010000001
      UniProtKB/TrEMBL
      A0A8I6AA66, B0JYS4

    2. NM_001419504.1 → NP_001406433.1  MAPK-interacting and spindle-stabilizing protein

      Status: VALIDATED

      Source sequence(s)
      JAXUCZ010000001
      UniProtKB/TrEMBL
      A0A8I6AA66, B0JYS4

    3. NM_001419505.1 → NP_001406434.1  MAPK-interacting and spindle-stabilizing protein

      Status: VALIDATED

      Source sequence(s)
      JAXUCZ010000001
      UniProtKB/TrEMBL
      A0A8I6AA66, B0JYS4

    4. NM_001419506.1 → NP_001406435.1  MAPK-interacting and spindle-stabilizing protein

      Status: VALIDATED

      Source sequence(s)
      JAXUCZ010000001
      UniProtKB/TrEMBL
      A0A8I6AA66, B0JYS4
      Related
      ENSRNOP00000097187.1, ENSRNOT00000117354.2

    RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCr8

    Genomic

    1. NC_086019.1 Reference GRCr8

      Range
      203084938..203095455 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_039087859.2 → XP_038943787.1  MAPK-interacting and spindle-stabilizing protein isoform X1

      UniProtKB/TrEMBL
      A0A8I6AA66, B0JYS4
      Related
      ENSRNOP00000102030.1, ENSRNOT00000165793.1
      Conserved Domains (1) summary
      pfam15822
      Location:1 → 166
      MISS; MAPK-interacting and spindle-stabilizing protein-like

    2. XM_063271516.1 → XP_063127586.1  MAPK-interacting and spindle-stabilizing protein isoform X1

      UniProtKB/TrEMBL
      A0A8I6AA66, B0JYS4

    3. XM_039087852.2 → XP_038943780.1  MAPK-interacting and spindle-stabilizing protein isoform X1

      UniProtKB/TrEMBL
      A0A8I6AA66, B0JYS4
      Related
      ENSRNOP00000088648.1, ENSRNOT00000114548.2
      Conserved Domains (1) summary
      pfam15822
      Location:1 → 166
      MISS; MAPK-interacting and spindle-stabilizing protein-like

    Suppressed Reference Sequence(s)

    The following Reference Sequences have been suppressed. Explain

    1. NM_001122782.1: Suppressed sequence

      Description
      NM_001122782.1: This RefSeq was removed because currently there is insufficient support for the transcript.
    Nucleotide Protein Strain
    Heading Accession and Version

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