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    LOC102554372 uncharacterized LOC102554372 [ Rattus norvegicus (Norway rat) ]

    Gene ID: 102554372, updated on 17-Aug-2024

    Summary

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    Symbol
    LOC102554372provided by RGD
    Full Name
    uncharacterized LOC102554372provided by RGD
    Primary source
    RGD:7667063
    See related
    AllianceGenome:RGD:7667063
    Gene type
    ncRNA
    RefSeq status
    MODEL
    Organism
    Rattus norvegicus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
    Expression
    Biased expression in Brain (RPKM 6.4), Testes (RPKM 6.0) and 9 other tissues See more
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    Genomic context

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    See LOC102554372 in Genome Data Viewer
    Location:
    4q34
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCr8 (GCF_036323735.1) 4 NC_086022.1 (120564019..120590903)
    RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 4 NC_051339.1 (119012925..119030617)
    106 previous assembly Rnor_6.0 (GCF_000001895.5) 4 NC_005103.4 (118373031..118385223)

    Chromosome 4 - NC_086022.1Genomic Context describing neighboring genes Neighboring gene poly(rC) binding protein 1 Neighboring gene translation machinery associated 7 homolog like 1 Neighboring gene aspartic peptidase, retroviral-like 1 Neighboring gene max dimerization protein 1 Neighboring gene uncharacterized LOC134486607

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
    • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
    • BioProject: PRJNA238328
    • Publication: PMID 24510058
    • Analysis date: Mon Jun 6 17:44:12 2016

    Bibliography

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    GeneRIFs: Gene References Into Functions

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCr8

    Genomic

    1. NC_086022.1 Reference GRCr8

      Range
      120564019..120590903
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RNA

    1. XR_010065854.1 RNA Sequence

    2. XR_353438.5 RNA Sequence

    3. XR_010065855.1 RNA Sequence

    Nucleotide Protein Strain
    Heading Accession and Version

    Gene LinkOut

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