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    Dio3 iodothyronine deiodinase 3 [ Rattus norvegicus (Norway rat) ]

    Gene ID: 29475, updated on 2-Nov-2024

    Summary

    Official Symbol
    Dio3provided by RGD
    Official Full Name
    iodothyronine deiodinase 3provided by RGD
    Primary source
    RGD:68420
    See related
    EnsemblRapid:ENSRNOG00000052017 AllianceGenome:RGD:68420
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Rattus norvegicus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
    Also known as
    5DIII; DIOIII
    Summary
    This is an intronless, imprinted gene that is preferentially expressed from the paternal allele. The encoded protein belongs to the iodothyronine deiodinase family, and catalyzes the inactivation of thyroid hormone by inner ring deiodination of the prohormone thyroxine (T4) and the bioactive hormone 3,3',5-triiodothyronine (T3) to inactive metabolites, 3,3',5' triiodothyronine (RT3) and 3,3'-diiodothyronine (T2), respectively. It is highly expressed in placenta, fetal and neonatal tissues, and thought to prevent premature exposure of developing fetal tissues to adult levels of thyroid hormones. It thus plays a critical role in mammalian development by regulating circulating fetal thyroid hormone concentration. This protein is a selenoprotein, containing the rare selenocysteine (Sec) amino acid at its active site. Sec is encoded by the UGA codon, which normally signals translation termination. The 3' UTRs of selenoprotein mRNAs contain a conserved stem-loop structure, designated the Sec insertion sequence (SECIS) element, that is necessary for the recognition of UGA as a Sec codon rather than as a stop signal. [provided by RefSeq, Jun 2016]
    Orthologs
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    Genomic context

    See Dio3 in Genome Data Viewer
    Location:
    6q32
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCr8 (GCF_036323735.1) 6 NC_086024.1 (135107072..135108933)
    RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 6 NC_051341.1 (129285747..129287608)
    106 previous assembly Rnor_6.0 (GCF_000001895.5) 6 NC_005105.4 (134627278..134629139)

    Chromosome 6 - NC_086024.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC120093269 Neighboring gene microRNA 1247 Neighboring gene uncharacterized LOC134479477 Neighboring gene uncharacterized LOC102546759

    Genomic regions, transcripts, and products

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Pathways from PubChem

    General gene information

    Markers

    Gene Ontology Provided by RGD

    Function Evidence Code Pubs
    enables thyroxine 5'-deiodinase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables thyroxine 5'-deiodinase activity ISO
    Inferred from Sequence Orthology
    more info
     
    enables thyroxine 5'-deiodinase activity TAS
    Traceable Author Statement
    more info
    PubMed 
    enables thyroxine 5-deiodinase activity ISO
    Inferred from Sequence Orthology
    more info
     
    Component Evidence Code Pubs
    located_in endosome membrane IEA
    Inferred from Electronic Annotation
    more info
     
    located_in intracellular membrane-bounded organelle ISO
    Inferred from Sequence Orthology
    more info
     
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    thyroxine 5-deiodinase
    Names
    deiodinase, iodothyronine, type 3
    deiodinase, iodothyronine, type III
    type 3 DI
    type III iodothyronine deiodinase
    type-III 5'-deiodinase
    NP_058906.3

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_017210.4NP_058906.3  thyroxine 5-deiodinase

      See identical proteins and their annotated locations for NP_058906.3

      Status: REVIEWED

      Source sequence(s)
      JAXUCZ010000006
      UniProtKB/Swiss-Prot
      P49897
      Related
      ENSRNOP00000093110.1, ENSRNOT00000078113.3
      Conserved Domains (1) summary
      pfam00837
      Location:39293
      T4_deiodinase; Iodothyronine deiodinase

    RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCr8

    Genomic

    1. NC_086024.1 Reference GRCr8

      Range
      135107072..135108933
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)