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    Nmu neuromedin U [ Rattus norvegicus (Norway rat) ]

    Gene ID: 63887, updated on 2-Nov-2024

    Summary

    Official Symbol
    Nmuprovided by RGD
    Official Full Name
    neuromedin Uprovided by RGD
    Primary source
    RGD:68388
    See related
    EnsemblRapid:ENSRNOG00000002164 AllianceGenome:RGD:68388
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Rattus norvegicus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
    Summary
    Enables type 1 neuromedin U receptor binding activity and type 2 neuromedin U receptor binding activity. Involved in several processes, including negative regulation of digestive system process; positive regulation of cell communication; and positive regulation of sensory perception of pain. Acts upstream of or within neuropeptide signaling pathway. Located in terminal bouton. Used to study obesity. Human ortholog(s) of this gene implicated in obesity. Orthologous to human NMU (neuromedin U). [provided by Alliance of Genome Resources, Nov 2024]
    Expression
    Biased expression in Adrenal (RPKM 3.1), Testes (RPKM 1.8) and 8 other tissues See more
    Orthologs
    NEW
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    Genomic context

    See Nmu in Genome Data Viewer
    Location:
    14p11
    Exon count:
    10
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCr8 (GCF_036323735.1) 14 NC_086032.1 (32198789..32226397)
    RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 14 NC_051349.1 (31844564..31872196)
    106 previous assembly Rnor_6.0 (GCF_000001895.5) 14 NC_005113.4 (34353683..34381968)

    Chromosome 14 - NC_086032.1Genomic Context describing neighboring genes Neighboring gene exocyst complex component 1 like Neighboring gene uncharacterized LOC102556008 Neighboring gene uncharacterized LOC120096594 Neighboring gene phosducin-like 2 Neighboring gene uncharacterized LOC134481741 Neighboring gene clock circadian regulator

    Genomic regions, transcripts, and products

    Expression

    • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
    • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
    • BioProject: PRJNA238328
    • Publication: PMID 24510058
    • Analysis date: Mon Jun 6 17:44:12 2016

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Pathways from PubChem

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Gene Ontology Provided by RGD

    Function Evidence Code Pubs
    enables neuromedin U receptor binding IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables neuromedin U receptor binding IDA
    Inferred from Direct Assay
    more info
    PubMed 
    enables neuromedin U receptor binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables type 1 neuromedin U receptor binding IDA
    Inferred from Direct Assay
    more info
    PubMed 
    enables type 1 neuromedin U receptor binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables type 1 neuromedin U receptor binding ISO
    Inferred from Sequence Orthology
    more info
     
    enables type 2 neuromedin U receptor binding IDA
    Inferred from Direct Assay
    more info
    PubMed 
    enables type 2 neuromedin U receptor binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables type 2 neuromedin U receptor binding ISO
    Inferred from Sequence Orthology
    more info
     
    Process Evidence Code Pubs
    involved_in eating behavior IDA
    Inferred from Direct Assay
    more info
    PubMed 
    involved_in energy homeostasis IDA
    Inferred from Direct Assay
    more info
    PubMed 
    involved_in energy homeostasis ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in gastric acid secretion IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in negative regulation of eating behavior IDA
    Inferred from Direct Assay
    more info
    PubMed 
    involved_in negative regulation of feeding behavior IDA
    Inferred from Direct Assay
    more info
    PubMed 
    involved_in negative regulation of gastric acid secretion IDA
    Inferred from Direct Assay
    more info
    PubMed 
    involved_in negative regulation of gastric emptying IDA
    Inferred from Direct Assay
    more info
    PubMed 
    involved_in neuropeptide signaling pathway IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    acts_upstream_of_or_within neuropeptide signaling pathway IDA
    Inferred from Direct Assay
    more info
    PubMed 
    involved_in neuropeptide signaling pathway IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in neuropeptide signaling pathway ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in photoperiodism IEP
    Inferred from Expression Pattern
    more info
    PubMed 
    involved_in positive regulation of cytosolic calcium ion concentration IDA
    Inferred from Direct Assay
    more info
    PubMed 
    involved_in positive regulation of heart rate IDA
    Inferred from Direct Assay
    more info
    PubMed 
    involved_in positive regulation of heat generation IDA
    Inferred from Direct Assay
    more info
    PubMed 
    involved_in positive regulation of hormone secretion IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in positive regulation of prolactin secretion IDA
    Inferred from Direct Assay
    more info
    PubMed 
    involved_in positive regulation of sensory perception of pain IDA
    Inferred from Direct Assay
    more info
    PubMed 
    involved_in positive regulation of smooth muscle contraction IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in positive regulation of smooth muscle contraction IDA
    Inferred from Direct Assay
    more info
    PubMed 
    involved_in positive regulation of smooth muscle contraction IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in positive regulation of stomach fundus smooth muscle contraction IDA
    Inferred from Direct Assay
    more info
    PubMed 
    involved_in positive regulation of synaptic transmission IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in positive regulation of synaptic transmission IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in positive regulation of systemic arterial blood pressure IDA
    Inferred from Direct Assay
    more info
    PubMed 
    involved_in regulation of circadian sleep/wake cycle, sleep IDA
    Inferred from Direct Assay
    more info
    PubMed 
    involved_in regulation of feeding behavior ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in regulation of grooming behavior IDA
    Inferred from Direct Assay
    more info
    PubMed 
    involved_in regulation of grooming behavior ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in regulation of smooth muscle contraction IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in temperature homeostasis ISO
    Inferred from Sequence Orthology
    more info
     
    Component Evidence Code Pubs
    located_in extracellular region IEA
    Inferred from Electronic Annotation
    more info
     
    is_active_in terminal bouton IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in terminal bouton IDA
    Inferred from Direct Assay
    more info
    PubMed 

    General protein information

    Preferred Names
    neuromedin-U
    Names
    neuromedin U precursor-related peptide/neuromedin U preproprotein

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_022239.3NP_071575.1  neuromedin-U precursor

      See identical proteins and their annotated locations for NP_071575.1

      Status: PROVISIONAL

      Source sequence(s)
      JAXUCZ010000014
      UniProtKB/Swiss-Prot
      P12760
      UniProtKB/TrEMBL
      A0A250SHE5, A6JCY2
      Related
      ENSRNOP00000103523.1, ENSRNOT00000159345.1
      Conserved Domains (1) summary
      pfam02070
      Location:144166
      NMU; Neuromedin U

    RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCr8

    Genomic

    1. NC_086032.1 Reference GRCr8

      Range
      32198789..32226397
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_006250872.5XP_006250934.1  neuromedin-U isoform X1

      UniProtKB/TrEMBL
      A0A8L2UHE1, A6JCY2
      Related
      ENSRNOP00000002941.5, ENSRNOT00000002941.6
      Conserved Domains (1) summary
      smart00084
      Location:134156
      NMU; Neuromedin U

    RNA

    1. XR_001841028.3 RNA Sequence