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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001172648.4 → NP_001166119.1 CUGBP Elav-like family member 3 isoform 2
Status: REVIEWED
- Description
- Transcript Variant: This variant (2) has an alternate 5' exon, as compared to variant 1. The resulting isoform (2) is shorter at the N-terminus, as compared to isoform 1.
- Source sequence(s)
-
AL589765, KF455029
- UniProtKB/TrEMBL
-
Q59G45
- Conserved Domains (3) summary
-
- cd12635
Location:47 → 127
- RRM2_CELF3_4_5_6; RNA recognition motif 2 in CUGBP Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and similar proteins
- cd12639
Location:329 → 407
- RRM3_CELF3_4_5_6; RNA recognition motif 2 in CUGBP Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and similar proteins
- cl17169
Location:2 → 41
- RRM_SF; RNA recognition motif (RRM) superfamily
-
NM_001172649.4 → NP_001166120.1 CUGBP Elav-like family member 3 isoform 3
See identical proteins and their annotated locations for NP_001166120.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (3) lacks an in-frame coding exon, as compared to variant 1. The resulting isoform (3) is shorter than isoform 1.
- Source sequence(s)
-
AL589765, KF455029
- Consensus CDS
-
CCDS53367.1
- UniProtKB/TrEMBL
-
H0Y623
- Related
- ENSP00000290585.4, ENST00000290585.8
- Conserved Domains (3) summary
-
- cd12632
Location:2 → 88
- RRM1_CELF3_4_5_6; RNA recognition motif 1 in CUGBP Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and similar proteins
- cd12635
Location:94 → 174
- RRM2_CELF3_4_5_6; RNA recognition motif 2 in CUGBP Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and similar proteins
- cd12639
Location:326 → 404
- RRM3_CELF3_4_5_6; RNA recognition motif 2 in CUGBP Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and similar proteins
-
NM_001291106.2 → NP_001278035.1 CUGBP Elav-like family member 3 isoform 4
See identical proteins and their annotated locations for NP_001278035.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (4) uses an alternate in-frame splice site in the coding region, compared to variant 1. The encoded protein (isoform 4) is shorter than isoform 1.
- Source sequence(s)
-
AL589765, KF455029
- UniProtKB/TrEMBL
-
H0Y623
- Conserved Domains (4) summary
-
- PRK12323
Location:214 → 350
- PRK12323; DNA polymerase III subunit gamma/tau
- cd12639
Location:375 → 453
- RRM3_CELF3_4_5_6; RNA recognition motif 2 (RRM2) found in CUGBP Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and similar proteins
- cd12632
Location:2 → 88
- RRM1_CELF3_4_5_6; RNA recognition motif 1 (RRM1) found in CUGBP Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and similar proteins
- cd12635
Location:94 → 174
- RRM2_CELF3_4_5_6; RNA recognition motif 2 (RRM2) found in CUGBP Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and similar proteins
-
NM_001291107.2 → NP_001278036.1 CUGBP Elav-like family member 3 isoform 5
See identical proteins and their annotated locations for NP_001278036.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (5) uses an alternate in-frame splice site in the coding region, compared to variant 1. The encoded protein (isoform 5) is shorter than isoform 1.
- Source sequence(s)
-
AL589765, KF455029
- UniProtKB/TrEMBL
-
H0Y623
- Related
- ENSP00000402503.1, ENST00000420342.1
- Conserved Domains (4) summary
-
- PRK12323
Location:213 → 350
- PRK12323; DNA polymerase III subunit gamma/tau
- cd12639
Location:375 → 453
- RRM3_CELF3_4_5_6; RNA recognition motif 2 (RRM2) found in CUGBP Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and similar proteins
- cd12632
Location:2 → 88
- RRM1_CELF3_4_5_6; RNA recognition motif 1 (RRM1) found in CUGBP Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and similar proteins
- cd12635
Location:93 → 173
- RRM2_CELF3_4_5_6; RNA recognition motif 2 (RRM2) found in CUGBP Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and similar proteins
-
NM_007185.7 → NP_009116.3 CUGBP Elav-like family member 3 isoform 1
See identical proteins and their annotated locations for NP_009116.3
Status: REVIEWED
- Description
- Transcript Variant: This variant (1) encodes the longest isoform (1).
- Source sequence(s)
-
AL589765, KF455029
- Consensus CDS
-
CCDS1002.1
- UniProtKB/Swiss-Prot
- B7ZKK6, O15414, Q499Y6, Q5SZQ7, Q5SZQ8, Q6NVK0, Q8IZ98, Q9BZC2, Q9HB30
- UniProtKB/TrEMBL
-
H0Y623
- Related
- ENSP00000290583.4, ENST00000290583.9
- Conserved Domains (4) summary
-
- PRK12323
Location:214 → 351
- PRK12323; DNA polymerase III subunit gamma/tau
- cd12639
Location:376 → 454
- RRM3_CELF3_4_5_6; RNA recognition motif 2 (RRM2) found in CUGBP Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and similar proteins
- cd12632
Location:2 → 88
- RRM1_CELF3_4_5_6; RNA recognition motif 1 (RRM1) found in CUGBP Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and similar proteins
- cd12635
Location:94 → 174
- RRM2_CELF3_4_5_6; RNA recognition motif 2 (RRM2) found in CUGBP Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and similar proteins
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCh38.p14 Primary Assembly
Genomic
-
NC_000001.11 Reference GRCh38.p14 Primary Assembly
- Range
-
151700058..151716803 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
Alternate T2T-CHM13v2.0
Genomic
-
NC_060925.1 Alternate T2T-CHM13v2.0
- Range
-
150823442..150840189 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)