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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001286679.2 → NP_001273608.1 la-related protein 6 isoform 3
Status: VALIDATED
- Description
- Transcript Variant: This variant (3) differs in the 5' UTR, lacks part of the 5' coding region, and initiates translation at a downstream start codon, compared to variant 1. The encoded isoform (3) has a shorter N-terminus, compared to isoform 1.
- Source sequence(s)
-
AC009269, AC090868, AI376944, AL833876, DA715263
- UniProtKB/Swiss-Prot
-
Q9BRS8
- Conserved Domains (2) summary
-
- cd12289
Location:1 → 108
- RRM_LARP6; RNA recognition motif in La-related protein 6 (LARP6) and similar proteins
- pfam12901
Location:284 → 298
- SUZ-C; SUZ-C motif
-
NM_018357.4 → NP_060827.2 la-related protein 6 isoform 1
See identical proteins and their annotated locations for NP_060827.2
Status: VALIDATED
- Description
- Transcript Variant: This variant (1) represents the longest transcript and encodes the longest isoform (1).
- Source sequence(s)
-
AC009269, AI376944, AL833876, DN992782
- Consensus CDS
-
CCDS32281.1
- UniProtKB/Swiss-Prot
- Q5XKE4, Q8N3N2, Q9BRS8, Q9NUR0
- Related
- ENSP00000299213.7, ENST00000299213.10
- Conserved Domains (3) summary
-
- cd08033
Location:93 → 169
- LARP_6; La RNA-binding domain of La-related protein 6
- pfam12901
Location:452 → 484
- SUZ-C; SUZ-C motif
- cd12289
Location:184 → 292
- RRM_LARP6; RNA recognition motif (RRM) found in La-related protein 6 (LARP6) and similar proteins
-
NM_197958.3 → NP_932062.1 la-related protein 6 isoform 2
See identical proteins and their annotated locations for NP_932062.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (2) lacks several exons and uses an alternate 3' terminal exon, compared to variant 1. The encoded isoform (2) has a shorter and distinct C-terminus, compared to isoform 1.
- Source sequence(s)
-
BC039153, DN992782
- Consensus CDS
-
CCDS10236.1
- UniProtKB/Swiss-Prot
-
Q9BRS8
- Related
- ENSP00000343869.3, ENST00000344870.4
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCh38.p14 Primary Assembly
Genomic
-
NC_000015.10 Reference GRCh38.p14 Primary Assembly
- Range
-
70829130..70854157 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
Alternate T2T-CHM13v2.0
Genomic
-
NC_060939.1 Alternate T2T-CHM13v2.0
- Range
-
68652085..68677121 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)