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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001144952.2 → NP_001138424.1 protein sidekick-2 precursor
See identical proteins and their annotated locations for NP_001138424.1
Status: VALIDATED
- Source sequence(s)
-
AB040947, AC032019, AC087301, AC124804, BC066363
- Consensus CDS
-
CCDS45769.1
- UniProtKB/Swiss-Prot
- A6NMR8, C9JA57, Q58EX2, Q86VY3, Q9NTD2, Q9NVB3, Q9P214
- Related
- ENSP00000376421.3, ENST00000392650.8
- Conserved Domains (6) summary
-
- cd00096
Location:326 → 394
- Ig; Immunoglobulin domain
- smart00408
Location:233 → 286
- IGc2; Immunoglobulin C-2 Type
- smart00410
Location:502 → 586
- IG_like; Immunoglobulin like
- cd00063
Location:1626 → 1719
- FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
- pfam07679
Location:402 → 492
- I-set; Immunoglobulin I-set domain
- cl11960
Location:416 → 492
- Ig; Immunoglobulin domain
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCh38.p14 Primary Assembly
Genomic
-
NC_000017.11 Reference GRCh38.p14 Primary Assembly
- Range
-
73334384..73644445 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_047436313.1 → XP_047292269.1 protein sidekick-2 isoform X3
-
XM_011524914.3 → XP_011523216.1 protein sidekick-2 isoform X1
- UniProtKB/Swiss-Prot
-
Q58EX2
- Conserved Domains (6) summary
-
- cd00096
Location:326 → 394
- Ig; Immunoglobulin domain
- smart00408
Location:233 → 286
- IGc2; Immunoglobulin C-2 Type
- smart00410
Location:502 → 586
- IG_like; Immunoglobulin like
- cd00063
Location:1607 → 1700
- FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
- pfam07679
Location:402 → 492
- I-set; Immunoglobulin I-set domain
- cl11960
Location:416 → 492
- Ig; Immunoglobulin domain
-
XM_011524915.3 → XP_011523217.1 protein sidekick-2 isoform X2
- Conserved Domains (6) summary
-
- cd00096
Location:326 → 394
- Ig; Immunoglobulin domain
- smart00408
Location:233 → 286
- IGc2; Immunoglobulin C-2 Type
- smart00410
Location:502 → 586
- IG_like; Immunoglobulin like
- cd00063
Location:1626 → 1719
- FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
- pfam07679
Location:402 → 492
- I-set; Immunoglobulin I-set domain
- cl11960
Location:416 → 492
- Ig; Immunoglobulin domain
-
XM_011524916.4 → XP_011523218.1 protein sidekick-2 isoform X4
- Conserved Domains (6) summary
-
- cd00096
Location:326 → 394
- Ig; Immunoglobulin domain
- smart00408
Location:233 → 286
- IGc2; Immunoglobulin C-2 Type
- smart00410
Location:502 → 586
- IG_like; Immunoglobulin like
- cd00063
Location:590 → 681
- FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
- pfam07679
Location:402 → 492
- I-set; Immunoglobulin I-set domain
- cl11960
Location:416 → 492
- Ig; Immunoglobulin domain
Alternate T2T-CHM13v2.0
Genomic
-
NC_060941.1 Alternate T2T-CHM13v2.0
- Range
-
74224177..74535383 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_054316536.1 → XP_054172511.1 protein sidekick-2 isoform X3
-
XM_054316534.1 → XP_054172509.1 protein sidekick-2 isoform X1
-
XM_054316535.1 → XP_054172510.1 protein sidekick-2 isoform X2
-
XM_054316537.1 → XP_054172512.1 protein sidekick-2 isoform X4
The following Reference Sequences have been suppressed. Explain
These RefSeqs were suppressed for the
cited reason(s). Suppressed RefSeqs do not appear in BLAST databases, related
sequence links, or BLAST links (BLink), but may still be retrieved by clicking on
their accession.version below.
-
NM_019064.3: Suppressed sequence
- Description
- NM_019064.3: This RefSeq was temporarily suppressed because the CDS was partial.