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    RIIAD1 regulatory subunit of type II PKA R-subunit domain containing 1 [ Homo sapiens (human) ]

    Gene ID: 284485, updated on 17-Sep-2024

    Summary

    Official Symbol
    RIIAD1provided by HGNC
    Official Full Name
    regulatory subunit of type II PKA R-subunit domain containing 1provided by HGNC
    Primary source
    HGNC:HGNC:26686
    See related
    Ensembl:ENSG00000178796 AllianceGenome:HGNC:26686
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Also known as
    C1orf230; NCRNA00166
    Expression
    Biased expression in testis (RPKM 5.0), brain (RPKM 1.9) and 5 other tissues See more
    Orthologs
    NEW
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    Try the new Transcript table

    Genomic context

    See RIIAD1 in Genome Data Viewer
    Location:
    1q21.3
    Exon count:
    10
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 1 NC_000001.11 (151711551..151729805)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 1 NC_060925.1 (150834937..150853183)
    RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 1 NC_000001.10 (151693998..151702281)

    Chromosome 1 - NC_000001.11Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC124904420 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 1723 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 1324 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr1:151591098-151591598 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr1:151591599-151592099 Neighboring gene sorting nexin 27 Neighboring gene RNA, U6 small nuclear 1062, pseudogene Neighboring gene H3K4me1 hESC enhancer GRCh37_chr1:151678174-151678674 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr1:151678675-151679175 Neighboring gene CUGBP Elav-like family member 3 Neighboring gene Sharpr-MPRA regulatory region 11691 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 1325 Neighboring gene RNA, U6 small nuclear 662, pseudogene Neighboring gene ribosomal protein S11 pseudogene 3

    Genomic regions, transcripts, and products

    Expression

    • Project title: HPA RNA-seq normal tissues HPA RNA-seq normal tissues
    • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
    • BioProject: PRJEB4337
    • Publication: PMID 24309898
    • Analysis date: Wed Apr 4 07:08:55 2018

    Pathways from PubChem

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General protein information

    Preferred Names
    RIIa domain-containing protein 1
    Names
    RIIa domain-containing protein C1orf230
    RIIa domain-containing protein ENSP00000357824
    regulatory subunit of type II PKA R-subunit (RIIa) domain containing 1

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001144956.3NP_001138428.1  RIIa domain-containing protein 1

      See identical proteins and their annotated locations for NP_001138428.1

      Status: VALIDATED

      Source sequence(s)
      AA393535, AL589765, CK300240, HY019544
      Consensus CDS
      CCDS53368.1
      UniProtKB/Swiss-Prot
      A6NNX1
      Related
      ENSP00000419249.1, ENST00000479191.2
      Conserved Domains (1) summary
      cl02594
      Location:4872
      DD_R_PKA; Dimerization/Docking domain of the Regulatory subunit of cAMP-dependent protein kinase and similar domains

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000001.11 Reference GRCh38.p14 Primary Assembly

      Range
      151711551..151729805
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_047418094.1XP_047274050.1  RIIa domain-containing protein 1 isoform X4

      UniProtKB/TrEMBL
      C9JPK7
      Related
      ENSP00000420280.1, ENST00000326413.7
      Conserved Domains (1) summary
      cd22971
      Location:5090
      DD_RIIAD1; dimerization/docking (D/D) domain found in RIIa domain-containing protein 1 (RIIAD1) and similar proteins
    2. XM_047418090.1XP_047274046.1  RIIa domain-containing protein 1 isoform X1

    3. XM_047418091.1XP_047274047.1  RIIa domain-containing protein 1 isoform X2

    4. XM_047418092.1XP_047274048.1  RIIa domain-containing protein 1 isoform X3

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060925.1 Alternate T2T-CHM13v2.0

      Range
      150834937..150853183
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_054336093.1XP_054192068.1  RIIa domain-containing protein 1 isoform X4

      UniProtKB/TrEMBL
      C9JPK7
    2. XM_054336090.1XP_054192065.1  RIIa domain-containing protein 1 isoform X1

    3. XM_054336091.1XP_054192066.1  RIIa domain-containing protein 1 isoform X2

    4. XM_054336092.1XP_054192067.1  RIIa domain-containing protein 1 isoform X3