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    LINC00115 long intergenic non-protein coding RNA 115 [ Homo sapiens (human) ]

    Gene ID: 79854, updated on 17-Sep-2024

    Summary

    Official Symbol
    LINC00115provided by HGNC
    Official Full Name
    long intergenic non-protein coding RNA 115provided by HGNC
    Primary source
    HGNC:HGNC:26211
    See related
    AllianceGenome:HGNC:26211
    Gene type
    ncRNA
    RefSeq status
    VALIDATED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Also known as
    NCRNA00115
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    Genomic context

    See LINC00115 in Genome Data Viewer
    Location:
    1p36.33
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 1 NC_000001.11 (826206..827522, complement)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 1 NC_060925.1 (255178..256494, complement)
    RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 1 NC_000001.10 (761586..762902, complement)

    Chromosome 1 - NC_000001.11Genomic Context describing neighboring genes Neighboring gene long intergenic non-protein coding RNA 1409 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr1:726662-727228 Neighboring gene uncharacterized LOC124903817 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 2 Neighboring gene family with sequence similarity 87 member B Neighboring gene ATAC-STARR-seq lymphoblastoid active region 3 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 1 Neighboring gene long intergenic non-protein coding RNA 1128 Neighboring gene ReSE screen-validated silencer GRCh37_chr1:772694-772873 Neighboring gene uncharacterized LOC107984850 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr1:802261-802760 Neighboring gene family with sequence similarity 41 member C

    Genomic regions, transcripts, and products

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_024321.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AL669831

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000001.11 Reference GRCh38.p14 Primary Assembly

      Range
      826206..827522 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060925.1 Alternate T2T-CHM13v2.0

      Range
      255178..256494 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Suppressed Reference Sequence(s)

    The following Reference Sequences have been suppressed. Explain

    1. NM_024796.1: Suppressed sequence

      Description
      NM_024796.1: This RefSeq was permanently suppressed because it is now thought that this gene does not encode a protein.