LINC00944 long intergenic non-protein coding RNA 944 [Homo sapiens (human)] - Gene

Summary

Official Symbol: LINC00944provided by HGNC
Official Full Name: long intergenic non-protein coding RNA 944provided by HGNC
Primary source: HGNC:HGNC:48640
See related: Ensembl:ENSG00000256128 AllianceGenome:HGNC:48640
Gene type: ncRNA
RefSeq status: VALIDATED
Organism: Homo sapiens
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as: DMDRMR
Expression: Low expression observed in reference dataset See more
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Genomic context

Location:: 12q24.32

Exon count:: 5

Annotation release	Status	Assembly	Chr	Location
RS_2024_08	current	GRCh38.p14 (GCF_000001405.40)	12	NC_000012.12 (126730701..126772262, complement)
RS_2024_08	current	T2T-CHM13v2.0 (GCF_009914755.1)	12	NC_060936.1 (126738298..126779853, complement)
RS_2024_09	previous assembly	GRCh37.p13 (GCF_000001405.25)	12	NC_000012.11 (127215247..127256808, complement)

Chromosome 12 - NC_000012.12 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Expression

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See details

Project title: HPA RNA-seq normal tissues HPA RNA-seq normal tissues
Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
BioProject: PRJEB4337
Publication: PMID 24309898
Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

A genome-wide association study identifies novel association between genetic variants in GGT7 and LINC00944 and hypertension.
Title: A genome-wide association study identifies novel association between genetic variants in GGT7 and LINC00944 and hypertension.
Immune-related IncRNA LINC00944 responds to variations in ADAR1 levels and it is associated with breast cancer prognosis.
Title: Immune-related IncRNA LINC00944 responds to variations in ADAR1 levels and it is associated with breast cancer prognosis.

Submit: New GeneRIF Correction

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See variants in ClinVar

See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

General gene information

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Markers

D12S307 (e-PCR), detects polymorphism
- UniSTS:25881

RH92063 (e-PCR)
- UniSTS:90430

RH92779 (e-PCR)
- UniSTS:85638

D12S307 (e-PCR), detects polymorphism
- UniSTS:46237

Other Names

DNA methylation-deregulated and RNA m6A reader-cooperating lncRNA

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.