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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_002853.4 → NP_002844.1 cell cycle checkpoint protein RAD1
See identical proteins and their annotated locations for NP_002844.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (1) represents the longer transcript and encodes the functional protein.
- Source sequence(s)
-
AC026801, AF011905
- Consensus CDS
-
CCDS3905.1
- UniProtKB/Swiss-Prot
- O60671, O75572, O95304, Q1W161, Q5KSM0, Q5KSM1, Q9UEP1
- Related
- ENSP00000371469.2, ENST00000382038.7
- Conserved Domains (1) summary
-
- pfam02144
Location:17 → 257
- Rad1; Repair protein Rad1/Rec1/Rad17
RNA
-
NR_026591.2 RNA Sequence
Status: REVIEWED
- Description
- Transcript Variant: This variant (2) lacks an alternate internal exon, compared to variant 1. This variant is represented as non-coding because the use of the supported translational start codon, as used in variant 1, renders the transcript a candidate for nonsense-mediated mRNA decay (NMD).
- Source sequence(s)
-
AC026801, AF090170, BC035771
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCh38.p14 Primary Assembly
Genomic
-
NC_000005.10 Reference GRCh38.p14 Primary Assembly
- Range
-
34905260..34915504 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
Alternate T2T-CHM13v2.0
Genomic
-
NC_060929.1 Alternate T2T-CHM13v2.0
- Range
-
35152293..35165170 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_054353023.1 → XP_054208998.1 cell cycle checkpoint protein RAD1 isoform X1
- UniProtKB/Swiss-Prot
- O60671, O75572, O95304, Q1W161, Q5KSM0, Q5KSM1, Q9UEP1
The following Reference Sequences have been suppressed. Explain
These RefSeqs were suppressed for the
cited reason(s). Suppressed RefSeqs do not appear in BLAST databases, related
sequence links, or BLAST links (BLink), but may still be retrieved by clicking on
their accession.version below.
-
NM_001033673.1: Suppressed sequence
- Description
- NM_001033673.1: This RefSeq was permanently suppressed becausse the transcript is a nonsense-mediated decay (NMD) candidate.
-
NM_133282.1: Suppressed sequence
- Description
- NM_133282.1: This RefSeq was permanently suppressed because because it represents the wrong CDS beginning at an internal start codon. If the ORF initiates at the normal upstream start codon, then the transcript is a nonsense-medi
-
NM_133377.2: Suppressed sequence
- Description
- NM_133377.2: This RefSeq was permanently suppressed because it contains an upstream ORF, translation from which would render it a nonsense-mediated mRNA decay (NMD) candidate.