U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    CSPG4P5 chondroitin sulfate proteoglycan 4 pseudogene 5 [ Homo sapiens (human) ]

    Gene ID: 114817, updated on 17-Sep-2024

    Summary

    Official Symbol
    CSPG4P5provided by HGNC
    Official Full Name
    chondroitin sulfate proteoglycan 4 pseudogene 5provided by HGNC
    Primary source
    HGNC:HGNC:29403
    See related
    AllianceGenome:HGNC:29403
    Gene type
    pseudo
    RefSeq status
    INFERRED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    See CSPG4P5 in Genome Data Viewer
    Location:
    15q25.2
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 15 NC_000015.10 (84402446..84406168, complement)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 15 NC_060939.1 (82133636..82137358)
    RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 15 NC_000015.9 (84957144..84960866, complement)

    Chromosome 15 - NC_000015.10Genomic Context describing neighboring genes Neighboring gene golgin A2 pseudogene Neighboring gene RNA, 7SL, cytoplasmic 417, pseudogene Neighboring gene dynamin 1 pseudogene 51 Neighboring gene UBE2Q2 pseudogene 11 Neighboring gene uncharacterized LOC103171574

    Genomic regions, transcripts, and products

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    Genomic

    1. NG_081266.1 

      Range
      101..3823
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000015.10 Reference GRCh38.p14 Primary Assembly

      Range
      84402446..84406168 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Reference GRCh38.p14 PATCHES

    Genomic

    1. NW_025791797.1 Reference GRCh38.p14 PATCHES

      Range
      894461..898183 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060939.1 Alternate T2T-CHM13v2.0

      Range
      82133636..82137358
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Suppressed Reference Sequence(s)

    The following Reference Sequences have been suppressed. Explain

    1. NG_068469.1: Suppressed sequence

      Description
      NG_068469.1: This RefSeq was removed because it was overextended and spanned two pseudogenes. It is being replaced by two, shorter RefSeq accession.
    2. NM_052919.1: Suppressed sequence

      Description
      NM_052919.1: This RefSeq was permanently suppressed because it is now thought that this gene is a pseudogene.