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    Gm826 predicted gene 826 [ Mus musculus (house mouse) ]

    Gene ID: 329554, updated on 17-Aug-2024

    Summary

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    Official Symbol
    Gm826provided by MGI
    Official Full Name
    predicted gene 826provided by MGI
    Primary source
    MGI:MGI:2685672
    See related
    AllianceGenome:MGI:2685672
    Gene type
    ncRNA
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Gm46773
    Expression
    Biased expression in heart adult (RPKM 2.2), liver E14.5 (RPKM 1.5) and 9 other tissues See more
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    Genomic context

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    See Gm826 in Genome Data Viewer
    Location:
    2; 2 H2
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 2 NC_000068.8 (160102246..160209866, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 2 NC_000068.7 (160311393..160349052, complement)

    Chromosome 2 - NC_000068.8Genomic Context describing neighboring genes Neighboring gene predicted gene, 34741 Neighboring gene predicted gene, 34805 Neighboring gene VISTA enhancer mm645 Neighboring gene CapStarr-seq enhancer MGSCv37_chr2:160153541-160153763 Neighboring gene predicted gene, 34980 Neighboring gene MAF bZIP transcription factor B Neighboring gene CapStarr-seq enhancer MGSCv37_chr2:160253255-160253456 Neighboring gene STARR-seq mESC enhancer starr_06256 Neighboring gene STARR-seq mESC enhancer starr_06258 Neighboring gene STARR-seq mESC enhancer starr_06259 Neighboring gene predicted gene 14221

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Mouse ENCODE transcriptome data Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

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    Related articles in PubMed

    1. A high-resolution anatomical atlas of the transcriptome in the mouse embryo. Diez-Roux G, et al. PLoS Biol, 2011 Jan 18. PMID 21267068, Free PMC Article
    2. Antisense transcription in the mammalian transcriptome. Katayama S, et al. Science, 2005 Sep 2. PMID 16141073
    3. High-efficiency full-length cDNA cloning. Carninci P, et al. Methods Enzymol, 1999. PMID 10349636
    4. RIKEN integrated sequence analysis (RISA) system--384-format sequencing pipeline with 384 multicapillary sequencer. Shibata K, et al. Genome Res, 2000 Nov. PMID 11076861, Free PMC Article
    5. Normalization and subtraction of cap-trapper-selected cDNAs to prepare full-length cDNA libraries for rapid discovery of new genes. Carninci P, et al. Genome Res, 2000 Oct. PMID 11042159, Free PMC Article

    See all (9) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Other Names

    • putative novel

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
    		  

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_184641.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AL591665

    2. NR_184642.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AL591665, AL591936

    3. NR_184643.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AL591665

    4. NR_184644.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AL591665, AL591936

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000068.8 Reference GRCm39 C57BL/6J

      Range
      160102246..160209866 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Suppressed Reference Sequence(s)

    The following Reference Sequences have been suppressed. Explain

    1. NM_001033411.3: Suppressed sequence

      Description
      NM_001033411.3: This RefSeq was removed because there is insufficient evidence that this locus is transcribed.
    Nucleotide Protein Strain
    Heading Accession and Version

    Gene LinkOut

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