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    4930519G04Rik RIKEN cDNA 4930519G04 gene [ Mus musculus (house mouse) ]

    Gene ID: 67593, updated on 17-Aug-2024

    Summary

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    Official Symbol
    4930519G04Rikprovided by MGI
    Official Full Name
    RIKEN cDNA 4930519G04 geneprovided by MGI
    Primary source
    MGI:MGI:1914843
    See related
    Ensembl:ENSMUSG00000029564 AllianceGenome:MGI:1914843
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    1700014B12Rik
    Expression
    Restricted expression toward testis adult (RPKM 7.2) See more
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    Genomic context

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    See 4930519G04Rik in Genome Data Viewer
    Location:
    5 F; 5 55.99 cM
    Exon count:
    16
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 5 NC_000071.7 (114991707..115021941)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 5 NC_000071.6 (114853646..114883880)

    Chromosome 5 - NC_000071.7Genomic Context describing neighboring genes Neighboring gene predicted gene, 46920 Neighboring gene predicted gene 13821 Neighboring gene microRNA 6240 Neighboring gene predicted gene 9936 Neighboring gene STARR-positive B cell enhancer ABC_E6367 Neighboring gene STARR-seq mESC enhancer starr_14091 Neighboring gene 2'-5' oligoadenylate synthetase-like 2 Neighboring gene predicted gene 13822

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Mouse ENCODE transcriptome data Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

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    Related articles in PubMed

    1. A conditional knockout resource for the genome-wide study of mouse gene function. Skarnes WC, et al. Nature, 2011 Jun 15. PMID 21677750, Free PMC Article
    2. A high-resolution anatomical atlas of the transcriptome in the mouse embryo. Diez-Roux G, et al. PLoS Biol, 2011 Jan 18. PMID 21267068, Free PMC Article
    3. Antisense transcription in the mammalian transcriptome. Katayama S, et al. Science, 2005 Sep 2. PMID 16141073
    4. High-efficiency full-length cDNA cloning. Carninci P, et al. Methods Enzymol, 1999. PMID 10349636
    5. RIKEN integrated sequence analysis (RISA) system--384-format sequencing pipeline with 384 multicapillary sequencer. Shibata K, et al. Genome Res, 2000 Nov. PMID 11076861, Free PMC Article

    See all (9) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
    		  

    General protein information

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    Preferred Names
    uncharacterized protein LOC67593

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_026263.2 → NP_080539.1  uncharacterized protein LOC67593

      See identical proteins and their annotated locations for NP_080539.1

      Status: VALIDATED

      Source sequence(s)
      AC116500, AK015843
      Consensus CDS
      CCDS19574.1
      UniProtKB/TrEMBL
      F7BGB3, Q9CPT7
      Related
      ENSMUSP00000031547.6, ENSMUST00000031547.12

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000071.7 Reference GRCm39 C57BL/6J

      Range
      114991707..115021941
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_006530441.4 → XP_006530504.1  uncharacterized protein LOC67593 isoform X1

      See identical proteins and their annotated locations for XP_006530504.1

      UniProtKB/TrEMBL
      F7BGB3

    2. XM_030254774.1 → XP_030110634.1  uncharacterized protein LOC67593 isoform X3

      UniProtKB/TrEMBL
      F7BGB3

    3. XM_030254773.1 → XP_030110633.1  uncharacterized protein LOC67593 isoform X1

      UniProtKB/TrEMBL
      F7BGB3

    4. XM_017321078.1 → XP_017176567.1  uncharacterized protein LOC67593 isoform X1

      UniProtKB/TrEMBL
      F7BGB3

    5. XM_006530440.2 → XP_006530503.1  uncharacterized protein LOC67593 isoform X1

      See identical proteins and their annotated locations for XP_006530503.1

      UniProtKB/TrEMBL
      F7BGB3

    6. XM_006530443.1 → XP_006530506.1  uncharacterized protein LOC67593 isoform X2

      See identical proteins and their annotated locations for XP_006530506.1

      UniProtKB/TrEMBL
      F7BGB3
      Related
      ENSMUSP00000116852.2, ENSMUST00000142582.5

    7. XM_006530445.3 → XP_006530508.1  uncharacterized protein LOC67593 isoform X4

      See identical proteins and their annotated locations for XP_006530508.1

      UniProtKB/TrEMBL
      F7BGB3, Q9DAB8
      Related
      ENSMUSP00000144618.2, ENSMUST00000134389.3
    Nucleotide Protein Strain
    Heading Accession and Version

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