Shisa4 shisa family member 4 [Mus musculus (house mouse)] - Gene

Summary

Official Symbol: Shisa4provided by MGI
Official Full Name: shisa family member 4provided by MGI
Primary source: MGI:MGI:1924802
See related: Ensembl:ENSMUSG00000041889 AllianceGenome:MGI:1924802
Gene type: protein coding
RefSeq status: VALIDATED
Organism: Mus musculus
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as: Tmem58; mShisa4; 9330132O05Rik
Summary: Predicted to be located in membrane. Is expressed in several structures, including eye; gut; limb; male reproductive gland or organ; and nervous system. Orthologous to human SHISA4 (shisa family member 4). [provided by Alliance of Genome Resources, Oct 2024]
Expression: Broad expression in cortex adult (RPKM 47.1), frontal lobe adult (RPKM 41.4) and 18 other tissues See more
Orthologs: human all
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Genomic context

Location:: 1 E4; 1 58.58 cM

Exon count:: 5

Annotation release	Status	Assembly	Chr	Location
RS_2024_02	current	GRCm39 (GCF_000001635.27)	1	NC_000067.7 (135298578..135302812, complement)
108.20200622	previous assembly	GRCm38.p6 (GCF_000001635.26)	1	NC_000067.6 (135371057..135375298, complement)

Chromosome 1 - NC_000067.7 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

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Expression

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See details

Project title: Mouse ENCODE transcriptome data Mouse ENCODE transcriptome data
Description: RNA profiling data sets generated by the Mouse ENCODE project.
BioProject: PRJNA66167
Publication: PMID 25409824
Analysis date: n/a

Bibliography

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GeneRIFs: Gene References Into Functions

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Variation

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Alleles

Alleles of this type are documented at Mouse Genome Informatics (MGI)

Targeted (4) 1 citation

General gene information

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Gene Ontology Provided by MGI

Component	Evidence Code	Pubs
located_in membrane	IEA Inferred from Electronic Annotation more info

General protein information

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Preferred Names: protein shisa-4

Names: shisa homolog 4; transmembrane protein 58

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.