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    FHAD1 forkhead associated phosphopeptide binding domain 1 [ Homo sapiens (human) ]

    Gene ID: 114827, updated on 17-Sep-2024

    Summary

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    Official Symbol
    FHAD1provided by HGNC
    Official Full Name
    forkhead associated phosphopeptide binding domain 1provided by HGNC
    Primary source
    HGNC:HGNC:29408
    See related
    Ensembl:ENSG00000142621 MIM:620889; AllianceGenome:HGNC:29408
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Expression
    Biased expression in testis (RPKM 6.7), lung (RPKM 1.0) and 1 other tissue See more
    Orthologs
    mouse all
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    Genomic context

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    See FHAD1 in Genome Data Viewer
    Location:
    1p36.21
    Exon count:
    45
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 1 NC_000001.11 (15236521..15403010)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 1 NC_060925.1 (14680876..14854268)
    RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 1 NC_000001.10 (15573719..15724824)

    Chromosome 1 - NC_000001.11Genomic Context describing neighboring genes Neighboring gene transmembrane protein 51 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr1:15530834-15531389 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_376 Neighboring gene MFF pseudogene 1 Neighboring gene ZBTB2 pseudogene 1 Neighboring gene ReSE screen-validated silencer GRCh37_chr1:15573554-15573727 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 300 Neighboring gene Sharpr-MPRA regulatory region 5897 Neighboring gene uncharacterized LOC124903853 Neighboring gene P300/CBP strongly-dependent group 1 enhancer GRCh37_chr1:15615395-15616594 Neighboring gene CDK7 strongly-dependent group 2 enhancer GRCh37_chr1:15631366-15632565 Neighboring gene uncharacterized LOC124903852 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr1:15651115-15651879 Neighboring gene uncharacterized LOC124903851 Neighboring gene FHAD1 antisense RNA 1 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 234 Neighboring gene P300/CBP strongly-dependent group 1 enhancer GRCh37_chr1:15678468-15679667 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 235 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr1:15691409-15691909 Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr1:15710597-15711244 Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr1:15711245-15711892 Neighboring gene ReSE screen-validated silencer GRCh37_chr1:15723563-15723730 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr1:15736144-15737006 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 302 Neighboring gene EFHD2 antisense RNA 1 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr1:15742803-15743302 Neighboring gene Sharpr-MPRA regulatory region 12140 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 303 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr1:15752556-15753456 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr1:15753457-15754355 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr1:15757008-15757508 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr1:15760169-15760668 Neighboring gene EF-hand domain family member D2 Neighboring gene chymotrypsin C

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: HPA RNA-seq normal tissues HPA RNA-seq normal tissues
    • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
    • BioProject: PRJEB4337
    • Publication: PMID 24309898
    • Analysis date: Wed Apr 4 07:08:55 2018

    Bibliography

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    Related articles in PubMed

    1. Epigenome-Wide Tumor DNA Methylation Profiling Identifies Novel Prognostic Biomarkers of Metastatic-Lethal Progression in Men Diagnosed with Clinically Localized Prostate Cancer. Zhao S, et al. Clin Cancer Res, 2017 Jan 1. PMID 27358489, Free PMC Article
    2. Prediction of the coding sequences of unidentified human genes. XXI. The complete sequences of 60 new cDNA clones from brain which code for large proteins. Nagase T, et al. DNA Res, 2001 Aug 31. PMID 11572484
    3. TRIP12 ubiquitination of glucocerebrosidase contributes to neurodegeneration in Parkinson's disease. Seo BA, et al. Neuron, 2021 Dec 1. PMID 34644545, Free PMC Article
    4. The DNA sequence and biological annotation of human chromosome 1. Gregory SG, et al. Nature, 2006 May 18. PMID 16710414
    5. Human transcription factor protein interaction networks. Göös H, et al. Nat Commun, 2022 Feb 9. PMID 35140242, Free PMC Article

    See all (17) citations in PubMed

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. Clinical trial of gene-disease association and gene-environment interaction. (HuGE Navigator)
      Title: Personalized smoking cessation: interactions between nicotine dose, dependence and quit-success genotype score.
    Submit: New GeneRIF Correction

    Phenotypes

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    Find tests for this gene in the NIH Genetic Testing Registry (GTR)

    Review eQTL and phenotype association data in this region using PheGenI

    Variation

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    See variants in ClinVar

    See studies and variants in dbVar

    See Variation Viewer (GRCh37.p13)

    See Variation Viewer (GRCh38)

    Genotypes

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Markers

    Homology

    Clone Names

    • FLJ31291, KIAA1937, DKFZp686G2134, DKFZp686P19183

    General protein information

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    Preferred Names
    forkhead-associated domain-containing protein 1
    Names
    FHA domain-containing protein 1
    forkhead-associated (FHA) phosphopeptide binding domain 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001391957.1 → NP_001378886.1  forkhead-associated domain-containing protein 1 isoform 4

      Status: VALIDATED

      Source sequence(s)
      AL031283, AL158174, AL391094
      Consensus CDS
      CCDS90866.1
      UniProtKB/TrEMBL
      A0A804HIA4
      Related
      ENSP00000509124.1, ENST00000688493.1
      Conserved Domains (3) summary
      PTZ00121
      Location:662 → 1462
      PTZ00121; MAEBL; Provisional
      COG1196
      Location:244 → 1043
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
      pfam00498
      Location:18 → 84
      FHA; FHA domain

    2. NM_052929.2 → NP_443161.1  forkhead-associated domain-containing protein 1 isoform 1

      See identical proteins and their annotated locations for NP_443161.1

      Status: VALIDATED

      Source sequence(s)
      AK057963, AK093300, AK093883, AK096961, AL031283, AL391094, AL833342, DA918616
      UniProtKB/Swiss-Prot
      B1AJZ9, Q0P6F5, Q8N8D3, Q8N9T6, Q8NA05
      Related
      ENSP00000351770.4, ENST00000358897.8
      Conserved Domains (6) summary
      COG1196
      Location:746 → 1401
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
      COG1716
      Location:15 → 86
      FHA; Forkhead associated (FHA) domain, binds pSer, pThr, pTyr [Signal transduction mechanisms]
      TIGR02169
      Location:275 → 1041
      SMC_prok_A; chromosome segregation protein SMC, primarily archaeal type
      pfam00498
      Location:18 → 84
      FHA; FHA domain
      pfam07851
      Location:394 → 474
      TMPIT; TMPIT-like protein
      cl19219
      Location:694 → 777
      DUF342; Protein of unknown function (DUF342)

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000001.11 Reference GRCh38.p14 Primary Assembly

      Range
      15236521..15403010
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_047443734.1 → XP_047299690.1  forkhead-associated domain-containing protein 1 isoform X6

    2. XM_017000198.3 → XP_016855687.1  forkhead-associated domain-containing protein 1 isoform X1

      Conserved Domains (5) summary
      COG1196
      Location:261 → 1060
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
      COG1716
      Location:32 → 103
      FHA; Forkhead associated (FHA) domain, binds pSer, pThr, pTyr [Signal transduction mechanisms]
      pfam00498
      Location:35 → 101
      FHA; FHA domain
      pfam07851
      Location:411 → 491
      TMPIT; TMPIT-like protein
      cl19219
      Location:733 → 816
      DUF342; Protein of unknown function (DUF342)

    3. XM_017000199.3 → XP_016855688.1  forkhead-associated domain-containing protein 1 isoform X1

      Conserved Domains (5) summary
      COG1196
      Location:261 → 1060
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
      COG1716
      Location:32 → 103
      FHA; Forkhead associated (FHA) domain, binds pSer, pThr, pTyr [Signal transduction mechanisms]
      pfam00498
      Location:35 → 101
      FHA; FHA domain
      pfam07851
      Location:411 → 491
      TMPIT; TMPIT-like protein
      cl19219
      Location:733 → 816
      DUF342; Protein of unknown function (DUF342)

    4. XM_017000200.2 → XP_016855689.1  forkhead-associated domain-containing protein 1 isoform X4

      Conserved Domains (5) summary
      COG1196
      Location:261 → 1060
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
      COG1716
      Location:32 → 103
      FHA; Forkhead associated (FHA) domain, binds pSer, pThr, pTyr [Signal transduction mechanisms]
      pfam00498
      Location:35 → 101
      FHA; FHA domain
      pfam07851
      Location:411 → 491
      TMPIT; TMPIT-like protein
      cl19219
      Location:733 → 816
      DUF342; Protein of unknown function (DUF342)

    5. XM_017000201.2 → XP_016855690.1  forkhead-associated domain-containing protein 1 isoform X5

      Conserved Domains (5) summary
      COG1196
      Location:261 → 1060
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
      COG1716
      Location:32 → 103
      FHA; Forkhead associated (FHA) domain, binds pSer, pThr, pTyr [Signal transduction mechanisms]
      pfam00498
      Location:35 → 101
      FHA; FHA domain
      pfam07851
      Location:411 → 491
      TMPIT; TMPIT-like protein
      cl19219
      Location:714 → 799
      DUF342; Protein of unknown function (DUF342)

    6. XM_017000206.3 → XP_016855695.1  forkhead-associated domain-containing protein 1 isoform X14

      Conserved Domains (4) summary
      PTZ00121
      Location:696 → 1459
      PTZ00121; MAEBL; Provisional
      COG1196
      Location:261 → 1060
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
      cd00060
      Location:33 → 110
      FHA; Forkhead associated domain (FHA); found in eukaryotic and prokaryotic proteins. Putative nuclear signalling domain. FHA domains may bind phosphothreonine, phosphoserine and sometimes phosphotyrosine. In eukaryotes, many FHA domain-containing proteins ...
      TIGR03354
      Location:36 → 202
      VI_FHA; type VI secretion system FHA domain protein

    7. XM_011540581.4 → XP_011538883.1  forkhead-associated domain-containing protein 1 isoform X6

      See identical proteins and their annotated locations for XP_011538883.1

      Conserved Domains (5) summary
      COG1196
      Location:261 → 1060
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
      COG1716
      Location:32 → 103
      FHA; Forkhead associated (FHA) domain, binds pSer, pThr, pTyr [Signal transduction mechanisms]
      pfam00498
      Location:35 → 101
      FHA; FHA domain
      pfam07851
      Location:411 → 491
      TMPIT; TMPIT-like protein
      cl19219
      Location:714 → 799
      DUF342; Protein of unknown function (DUF342)

    8. XM_011540582.4 → XP_011538884.1  forkhead-associated domain-containing protein 1 isoform X6

      See identical proteins and their annotated locations for XP_011538884.1

      Conserved Domains (5) summary
      COG1196
      Location:261 → 1060
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
      COG1716
      Location:32 → 103
      FHA; Forkhead associated (FHA) domain, binds pSer, pThr, pTyr [Signal transduction mechanisms]
      pfam00498
      Location:35 → 101
      FHA; FHA domain
      pfam07851
      Location:411 → 491
      TMPIT; TMPIT-like protein
      cl19219
      Location:714 → 799
      DUF342; Protein of unknown function (DUF342)

    9. XM_017000203.3 → XP_016855692.1  forkhead-associated domain-containing protein 1 isoform X10

      Conserved Domains (5) summary
      COG1196
      Location:261 → 1060
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
      COG1716
      Location:32 → 103
      FHA; Forkhead associated (FHA) domain, binds pSer, pThr, pTyr [Signal transduction mechanisms]
      pfam00498
      Location:35 → 101
      FHA; FHA domain
      pfam07851
      Location:411 → 491
      TMPIT; TMPIT-like protein
      cl19219
      Location:714 → 799
      DUF342; Protein of unknown function (DUF342)

    10. XM_011540576.3 → XP_011538878.1  forkhead-associated domain-containing protein 1 isoform X2

      Conserved Domains (5) summary
      COG1196
      Location:261 → 1060
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
      COG1716
      Location:32 → 103
      FHA; Forkhead associated (FHA) domain, binds pSer, pThr, pTyr [Signal transduction mechanisms]
      pfam00498
      Location:35 → 101
      FHA; FHA domain
      pfam07851
      Location:411 → 491
      TMPIT; TMPIT-like protein
      cl19219
      Location:733 → 816
      DUF342; Protein of unknown function (DUF342)

    11. XM_024452918.2 → XP_024308686.1  forkhead-associated domain-containing protein 1 isoform X36

      Conserved Domains (3) summary
      pfam00498
      Location:35 → 101
      FHA; FHA domain
      cl25732
      Location:261 → 1055
      SMC_N; RecF/RecN/SMC N terminal domain
      cl26464
      Location:102 → 205
      Atrophin-1; Atrophin-1 family

    12. XM_017000202.2 → XP_016855691.1  forkhead-associated domain-containing protein 1 isoform X7

      Conserved Domains (4) summary
      COG1196
      Location:234 → 1024
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
      COG1716
      Location:32 → 103
      FHA; Forkhead associated (FHA) domain, binds pSer, pThr, pTyr [Signal transduction mechanisms]
      pfam00498
      Location:35 → 101
      FHA; FHA domain
      cl19219
      Location:678 → 763
      DUF342; Protein of unknown function (DUF342)

    13. XM_017000205.2 → XP_016855694.1  forkhead-associated domain-containing protein 1 isoform X13

    14. XM_017000207.3 → XP_016855696.1  forkhead-associated domain-containing protein 1 isoform X15

      Conserved Domains (5) summary
      COG1196
      Location:259 → 981
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
      COG1716
      Location:32 → 103
      FHA; Forkhead associated (FHA) domain, binds pSer, pThr, pTyr [Signal transduction mechanisms]
      pfam00498
      Location:35 → 101
      FHA; FHA domain
      pfam07851
      Location:332 → 412
      TMPIT; TMPIT-like protein
      cl19219
      Location:654 → 737
      DUF342; Protein of unknown function (DUF342)

    15. XM_024452903.2 → XP_024308671.1  forkhead-associated domain-containing protein 1 isoform X21

      Conserved Domains (3) summary
      pfam00498
      Location:35 → 101
      FHA; FHA domain
      cl25732
      Location:261 → 1060
      SMC_N; RecF/RecN/SMC N terminal domain
      cl26464
      Location:102 → 229
      Atrophin-1; Atrophin-1 family

    16. XM_047443798.1 → XP_047299754.1  forkhead-associated domain-containing protein 1 isoform X21

    17. XM_024452912.2 → XP_024308680.1  forkhead-associated domain-containing protein 1 isoform X21

      Conserved Domains (3) summary
      pfam00498
      Location:35 → 101
      FHA; FHA domain
      cl25732
      Location:261 → 1060
      SMC_N; RecF/RecN/SMC N terminal domain
      cl26464
      Location:102 → 229
      Atrophin-1; Atrophin-1 family

    18. XM_011540584.4 → XP_011538886.1  forkhead-associated domain-containing protein 1 isoform X8

      Conserved Domains (5) summary
      COG1196
      Location:261 → 1060
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
      COG1716
      Location:32 → 103
      FHA; Forkhead associated (FHA) domain, binds pSer, pThr, pTyr [Signal transduction mechanisms]
      pfam00498
      Location:35 → 101
      FHA; FHA domain
      pfam07851
      Location:411 → 491
      TMPIT; TMPIT-like protein
      cl19219
      Location:733 → 816
      DUF342; Protein of unknown function (DUF342)

    19. XM_047443776.1 → XP_047299732.1  forkhead-associated domain-containing protein 1 isoform X18

    20. XM_024452887.2 → XP_024308655.1  forkhead-associated domain-containing protein 1 isoform X11

      Conserved Domains (4) summary
      pfam00498
      Location:35 → 101
      FHA; FHA domain
      cl25732
      Location:261 → 1060
      SMC_N; RecF/RecN/SMC N terminal domain
      cl26464
      Location:102 → 229
      Atrophin-1; Atrophin-1 family
      cl26511
      Location:678 → 1452
      Neuromodulin_N; Gap junction protein N-terminal region

    21. XM_011540588.4 → XP_011538890.1  forkhead-associated domain-containing protein 1 isoform X16

      Conserved Domains (5) summary
      COG1196
      Location:261 → 1060
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
      COG1716
      Location:32 → 103
      FHA; Forkhead associated (FHA) domain, binds pSer, pThr, pTyr [Signal transduction mechanisms]
      pfam00498
      Location:35 → 101
      FHA; FHA domain
      pfam07851
      Location:411 → 491
      TMPIT; TMPIT-like protein
      cl19219
      Location:714 → 799
      DUF342; Protein of unknown function (DUF342)

    22. XM_047443743.1 → XP_047299699.1  forkhead-associated domain-containing protein 1 isoform X12

    23. XM_047443774.1 → XP_047299730.1  forkhead-associated domain-containing protein 1 isoform X17

    24. XM_047443790.1 → XP_047299746.1  forkhead-associated domain-containing protein 1 isoform X20

    25. XM_017000211.3 → XP_016855700.1  forkhead-associated domain-containing protein 1 isoform X25

    26. XM_047443801.1 → XP_047299757.1  forkhead-associated domain-containing protein 1 isoform X24

    27. XM_017000210.3 → XP_016855699.1  forkhead-associated domain-containing protein 1 isoform X22

    28. XM_017000212.3 → XP_016855701.1  forkhead-associated domain-containing protein 1 isoform X26

    29. XM_017000213.2 → XP_016855702.1  forkhead-associated domain-containing protein 1 isoform X30

    30. XM_017000214.3 → XP_016855703.1  forkhead-associated domain-containing protein 1 isoform X31

    31. XM_011540597.4 → XP_011538899.1  forkhead-associated domain-containing protein 1 isoform X29

      Conserved Domains (5) summary
      COG1716
      Location:32 → 103
      FHA; Forkhead associated (FHA) domain, binds pSer, pThr, pTyr [Signal transduction mechanisms]
      TIGR04523
      Location:314 → 1003
      Mplasa_alph_rch; helix-rich Mycoplasma protein
      pfam00498
      Location:35 → 101
      FHA; FHA domain
      pfam07851
      Location:411 → 491
      TMPIT; TMPIT-like protein
      cl19219
      Location:714 → 799
      DUF342; Protein of unknown function (DUF342)

    32. XM_011540598.4 → XP_011538900.1  forkhead-associated domain-containing protein 1 isoform X33

      Conserved Domains (5) summary
      COG1716
      Location:32 → 103
      FHA; Forkhead associated (FHA) domain, binds pSer, pThr, pTyr [Signal transduction mechanisms]
      cd00890
      Location:297 → 417
      Prefoldin; Prefoldin is a hexameric molecular chaperone complex, found in both eukaryotes and archaea, that binds and stabilizes newly synthesized polypeptides allowing them to fold correctly. The complex contains two alpha and four beta subunits, the two subunits ...
      pfam00498
      Location:35 → 101
      FHA; FHA domain
      pfam07851
      Location:411 → 491
      TMPIT; TMPIT-like protein
      pfam15619
      Location:271 → 478
      Lebercilin; Ciliary protein causing Leber congenital amaurosis disease

    33. XM_011540577.3 → XP_011538879.1  forkhead-associated domain-containing protein 1 isoform X3

      Conserved Domains (5) summary
      COG1196
      Location:244 → 1043
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
      COG1716
      Location:15 → 86
      FHA; Forkhead associated (FHA) domain, binds pSer, pThr, pTyr [Signal transduction mechanisms]
      pfam00498
      Location:18 → 84
      FHA; FHA domain
      pfam07851
      Location:394 → 474
      TMPIT; TMPIT-like protein
      cl19219
      Location:716 → 799
      DUF342; Protein of unknown function (DUF342)

    34. XM_047443737.1 → XP_047299693.1  forkhead-associated domain-containing protein 1 isoform X9

    35. XM_024452898.2 → XP_024308666.1  forkhead-associated domain-containing protein 1 isoform X19

      Conserved Domains (3) summary
      cl25732
      Location:175 → 974
      SMC_N; RecF/RecN/SMC N terminal domain
      cl26464
      Location:50 → 119
      Atrophin-1; Atrophin-1 family
      cl26511
      Location:610 → 1340
      Neuromodulin_N; Gap junction protein N-terminal region

    36. XM_047443847.1 → XP_047299803.1  forkhead-associated domain-containing protein 1 isoform X35

    37. XM_047443846.1 → XP_047299802.1  forkhead-associated domain-containing protein 1 isoform X34

    38. XM_011540592.2 → XP_011538894.1  forkhead-associated domain-containing protein 1 isoform X23

      See identical proteins and their annotated locations for XP_011538894.1

      Conserved Domains (3) summary
      COG1196
      Location:148 → 947
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
      pfam07851
      Location:298 → 378
      TMPIT; TMPIT-like protein
      cl19219
      Location:601 → 686
      DUF342; Protein of unknown function (DUF342)

    39. XM_011540595.2 → XP_011538897.1  forkhead-associated domain-containing protein 1 isoform X27

      Conserved Domains (4) summary
      COG1196
      Location:445 → 1204
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
      TIGR02168
      Location:50 → 791
      SMC_prok_B; chromosome segregation protein SMC, common bacterial type
      pfam07851
      Location:200 → 280
      TMPIT; TMPIT-like protein
      cl19219
      Location:522 → 605
      DUF342; Protein of unknown function (DUF342)

    40. XM_047443835.1 → XP_047299791.1  forkhead-associated domain-containing protein 1 isoform X28

    41. XM_011540596.3 → XP_011538898.2  forkhead-associated domain-containing protein 1 isoform X32

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060925.1 Alternate T2T-CHM13v2.0

      Range
      14680876..14854268
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_054334112.1 → XP_054190087.1  forkhead-associated domain-containing protein 1 isoform X1

    2. XM_054334122.1 → XP_054190097.1  forkhead-associated domain-containing protein 1 isoform X7

    3. XM_054334129.1 → XP_054190104.1  forkhead-associated domain-containing protein 1 isoform X24

    4. XM_054334138.1 → XP_054190113.1  forkhead-associated domain-containing protein 1 isoform X59

    5. XM_054334108.1 → XP_054190083.1  forkhead-associated domain-containing protein 1 isoform X40

      UniProtKB/TrEMBL
      A0A804HIA4

    6. XM_054334106.1 → XP_054190081.1  forkhead-associated domain-containing protein 1 isoform X40

      UniProtKB/TrEMBL
      A0A804HIA4

    7. XM_054334107.1 → XP_054190082.1  forkhead-associated domain-containing protein 1 isoform X40

      UniProtKB/TrEMBL
      A0A804HIA4

    8. XM_054334124.1 → XP_054190099.1  forkhead-associated domain-containing protein 1 isoform X52

    9. XM_054334111.1 → XP_054190086.1  forkhead-associated domain-containing protein 1 isoform X42

    10. XM_054334102.1 → XP_054190077.1  forkhead-associated domain-containing protein 1 isoform X3

    11. XM_054334104.1 → XP_054190079.1  forkhead-associated domain-containing protein 1 isoform X38

    12. XM_054334105.1 → XP_054190080.1  forkhead-associated domain-containing protein 1 isoform X39

    13. XM_054334117.1 → XP_054190092.1  forkhead-associated domain-containing protein 1 isoform X47

    14. XM_054334113.1 → XP_054190088.1  forkhead-associated domain-containing protein 1 isoform X43

    15. XM_054334114.1 → XP_054190089.1  forkhead-associated domain-containing protein 1 isoform X44

    16. XM_054334120.1 → XP_054190095.1  forkhead-associated domain-containing protein 1 isoform X49

    17. XM_054334103.1 → XP_054190078.1  forkhead-associated domain-containing protein 1 isoform X37

    18. XM_054334115.1 → XP_054190090.1  forkhead-associated domain-containing protein 1 isoform X45

    19. XM_054334121.1 → XP_054190096.1  forkhead-associated domain-containing protein 1 isoform X50

    20. XM_054334109.1 → XP_054190084.1  forkhead-associated domain-containing protein 1 isoform X41

    21. XM_054334123.1 → XP_054190098.1  forkhead-associated domain-containing protein 1 isoform X51

    22. XM_054334125.1 → XP_054190100.1  forkhead-associated domain-containing protein 1 isoform X53

    23. XM_054334110.1 → XP_054190085.1  forkhead-associated domain-containing protein 1 isoform X9

    24. XM_054334127.1 → XP_054190102.1  forkhead-associated domain-containing protein 1 isoform X55

    25. XM_054334116.1 → XP_054190091.1  forkhead-associated domain-containing protein 1 isoform X46

    26. XM_054334119.1 → XP_054190094.1  forkhead-associated domain-containing protein 1 isoform X48

    27. XM_054334118.1 → XP_054190093.1  forkhead-associated domain-containing protein 1 isoform X19

    28. XM_054334126.1 → XP_054190101.1  forkhead-associated domain-containing protein 1 isoform X54

    29. XM_054334132.1 → XP_054190107.1  forkhead-associated domain-containing protein 1 isoform X56

    30. XM_054334137.1 → XP_054190112.1  forkhead-associated domain-containing protein 1 isoform X35

    31. XM_054334135.1 → XP_054190110.1  forkhead-associated domain-containing protein 1 isoform X58

    32. XM_054334136.1 → XP_054190111.1  forkhead-associated domain-containing protein 1 isoform X34

    33. XM_054334134.1 → XP_054190109.1  forkhead-associated domain-containing protein 1 isoform X57

    34. XM_054334128.1 → XP_054190103.1  forkhead-associated domain-containing protein 1 isoform X23

    35. XM_054334130.1 → XP_054190105.1  forkhead-associated domain-containing protein 1 isoform X27

    36. XM_054334131.1 → XP_054190106.1  forkhead-associated domain-containing protein 1 isoform X28

    37. XM_054334133.1 → XP_054190108.1  forkhead-associated domain-containing protein 1 isoform X32

    RNA

    1. XR_008485897.1 RNA Sequence

    2. XR_008485895.1 RNA Sequence

    3. XR_008485898.1 RNA Sequence

    4. XR_008485894.1 RNA Sequence

    5. XR_008485896.1 RNA Sequence

    6. XR_008485902.1 RNA Sequence

    7. XR_008485901.1 RNA Sequence

    8. XR_008485903.1 RNA Sequence

    9. XR_008485899.1 RNA Sequence

    10. XR_008485900.1 RNA Sequence

    11. XR_008485904.1 RNA Sequence

    12. XR_008485905.1 RNA Sequence

    13. XR_008485906.1 RNA Sequence

    Suppressed Reference Sequence(s)

    The following Reference Sequences have been suppressed. Explain

    1. NM_001387888.1: Suppressed sequence

      Description
      NM_001387888.1: This RefSeq was removed because currently there is support for the transcript but not for the protein.

    2. NM_001391921.1: Suppressed sequence

      Description
      NM_001391921.1: This RefSeq was removed because currently there is support for the transcript but not for the protein.
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    B1AJZ9.2 GenPept UniProtKB/Swiss-Prot:B1AJZ9

    Gene LinkOut

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