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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
Genomic
-
NG_011934.2 RefSeqGene
- Range
-
12662..50065
- Download
- GenBank, FASTA, Sequence Viewer (Graphics), LRG_544
mRNA and Protein(s)
-
NM_139025.5 → NP_620594.1 A disintegrin and metalloproteinase with thrombospondin motifs 13 isoform 1 preproprotein
See identical proteins and their annotated locations for NP_620594.1
Status: REVIEWED
- Source sequence(s)
-
AL593848
- Consensus CDS
-
CCDS6970.1
- UniProtKB/Swiss-Prot
- Q6UY16, Q710F6, Q711T8, Q76LX8, Q96L37, Q9H0G3, Q9UGQ1
- Related
- ENSP00000360997.3, ENST00000371929.7
- Conserved Domains (3) summary
-
- smart00209
Location:387 → 439
- TSP1; Thrombospondin type 1 repeats
- cd04273
Location:80 → 283
- ZnMc_ADAMTS_like; Zinc-dependent metalloprotease, ADAMTS_like subgroup. ADAMs (A Disintegrin And Metalloprotease) are glycoproteins, which play roles in cell signaling, cell fusion, and cell-cell interactions. This particular subfamily represents domain architectures that ...
- pfam05986
Location:559 → 680
- ADAM_spacer1; ADAM-TS Spacer 1
-
NM_139026.6 → NP_620595.1 A disintegrin and metalloproteinase with thrombospondin motifs 13 isoform 3 preproprotein
See identical proteins and their annotated locations for NP_620595.1
Status: REVIEWED
- Source sequence(s)
-
AL593848
- Consensus CDS
-
CCDS6971.1
- UniProtKB/Swiss-Prot
-
Q76LX8
- Related
- ENSP00000348997.2, ENST00000356589.6
- Conserved Domains (3) summary
-
- smart00209
Location:356 → 408
- TSP1; Thrombospondin type 1 repeats
- cd04273
Location:80 → 277
- ZnMc_ADAMTS_like; Zinc-dependent metalloprotease, ADAMTS_like subgroup. ADAMs (A Disintegrin And Metalloprotease) are glycoproteins, which play roles in cell signaling, cell fusion, and cell-cell interactions. This particular subfamily represents domain architectures that ...
- pfam05986
Location:528 → 649
- ADAM_spacer1; ADAM-TS Spacer 1
-
NM_139027.6 → NP_620596.2 A disintegrin and metalloproteinase with thrombospondin motifs 13 isoform 2 preproprotein
See identical proteins and their annotated locations for NP_620596.2
Status: REVIEWED
- Source sequence(s)
-
AL593848
- Consensus CDS
-
CCDS6972.1
- UniProtKB/Swiss-Prot
-
Q76LX8
- Related
- ENSP00000347927.2, ENST00000355699.7
- Conserved Domains (3) summary
-
- smart00209
Location:387 → 439
- TSP1; Thrombospondin type 1 repeats
- cd04273
Location:80 → 283
- ZnMc_ADAMTS_like; Zinc-dependent metalloprotease, ADAMTS_like subgroup. ADAMs (A Disintegrin And Metalloprotease) are glycoproteins, which play roles in cell signaling, cell fusion, and cell-cell interactions. This particular subfamily represents domain architectures that ...
- pfam05986
Location:559 → 680
- ADAM_spacer1; ADAM-TS Spacer 1
RNA
-
NR_024514.3 RNA Sequence
Status: REVIEWED
- Source sequence(s)
-
AL593848
- Related
-
ENST00000485925.5
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCh38.p14 Primary Assembly
Genomic
-
NC_000009.12 Reference GRCh38.p14 Primary Assembly
- Range
-
133414337..133459386
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_017014233.2 → XP_016869722.1 A disintegrin and metalloproteinase with thrombospondin motifs 13 isoform X3
- Conserved Domains (3) summary
-
- smart00209
Location:257 → 309
- TSP1; Thrombospondin type 1 repeats
- pfam05986
Location:429 → 550
- ADAM_spacer1; ADAM-TS Spacer 1
- cl00064
Location:1 → 153
- ZnMc; Zinc-dependent metalloprotease. This super-family of metalloproteases contains two major branches, the astacin-like proteases and the adamalysin/reprolysin-like proteases. Both branches have wide phylogenetic distribution, and contain sub-families, which ...
-
XM_017014232.2 → XP_016869721.1 A disintegrin and metalloproteinase with thrombospondin motifs 13 isoform X1
-
XM_047422699.1 → XP_047278655.1 A disintegrin and metalloproteinase with thrombospondin motifs 13 isoform X2
-
XM_017014235.2 → XP_016869724.1 A disintegrin and metalloproteinase with thrombospondin motifs 13 isoform X8
-
XM_047422700.1 → XP_047278656.1 A disintegrin and metalloproteinase with thrombospondin motifs 13 isoform X9
-
XM_017014234.2 → XP_016869723.1 A disintegrin and metalloproteinase with thrombospondin motifs 13 isoform X5
- Conserved Domains (2) summary
-
- smart00209
Location:57 → 109
- TSP1; Thrombospondin type 1 repeats
- pfam05986
Location:229 → 350
- ADAM_spacer1; ADAM-TS Spacer 1
-
XM_011518176.4 → XP_011516478.1 A disintegrin and metalloproteinase with thrombospondin motifs 13 isoform X4
See identical proteins and their annotated locations for XP_011516478.1
- Conserved Domains (2) summary
-
- smart00209
Location:59 → 111
- TSP1; Thrombospondin type 1 repeats
- pfam05986
Location:231 → 352
- ADAM_spacer1; ADAM-TS Spacer 1
-
XM_011518179.1 → XP_011516481.1 A disintegrin and metalloproteinase with thrombospondin motifs 13 isoform X7
See identical proteins and their annotated locations for XP_011516481.1
- Conserved Domains (1) summary
-
- smart00209
Location:301 → 360
- TSP1; Thrombospondin type 1 repeats
-
XM_011518178.3 → XP_011516480.1 A disintegrin and metalloproteinase with thrombospondin motifs 13 isoform X6
See identical proteins and their annotated locations for XP_011516480.1
- Conserved Domains (1) summary
-
- pfam05986
Location:114 → 235
- ADAM_spacer1; ADAM-TS Spacer 1
Reference GRCh38.p14 PATCHES
Genomic
-
NW_009646201.1 Reference GRCh38.p14 PATCHES
- Range
-
240431..285480
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_054331564.1 → XP_054187539.1 A disintegrin and metalloproteinase with thrombospondin motifs 13 isoform X3
-
XM_054331562.1 → XP_054187537.1 A disintegrin and metalloproteinase with thrombospondin motifs 13 isoform X1
-
XM_054331563.1 → XP_054187538.1 A disintegrin and metalloproteinase with thrombospondin motifs 13 isoform X2
-
XM_054331569.1 → XP_054187544.1 A disintegrin and metalloproteinase with thrombospondin motifs 13 isoform X8
-
XM_054331570.1 → XP_054187545.1 A disintegrin and metalloproteinase with thrombospondin motifs 13 isoform X9
-
XM_054331566.1 → XP_054187541.1 A disintegrin and metalloproteinase with thrombospondin motifs 13 isoform X5
-
XM_054331565.1 → XP_054187540.1 A disintegrin and metalloproteinase with thrombospondin motifs 13 isoform X4
-
XM_054331568.1 → XP_054187543.1 A disintegrin and metalloproteinase with thrombospondin motifs 13 isoform X7
-
XM_054331567.1 → XP_054187542.1 A disintegrin and metalloproteinase with thrombospondin motifs 13 isoform X6
Alternate T2T-CHM13v2.0
Genomic
-
NC_060933.1 Alternate T2T-CHM13v2.0
- Range
-
145628765..145673828
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_054361858.1 → XP_054217833.1 A disintegrin and metalloproteinase with thrombospondin motifs 13 isoform X10
-
XM_054361860.1 → XP_054217835.1 A disintegrin and metalloproteinase with thrombospondin motifs 13 isoform X3
-
XM_054361859.1 → XP_054217834.1 A disintegrin and metalloproteinase with thrombospondin motifs 13 isoform X1
-
XM_054361862.1 → XP_054217837.1 A disintegrin and metalloproteinase with thrombospondin motifs 13 isoform X5
-
XM_054361861.1 → XP_054217836.1 A disintegrin and metalloproteinase with thrombospondin motifs 13 isoform X4
-
XM_054361864.1 → XP_054217839.1 A disintegrin and metalloproteinase with thrombospondin motifs 13 isoform X7
-
XM_054361863.1 → XP_054217838.1 A disintegrin and metalloproteinase with thrombospondin motifs 13 isoform X6
The following Reference Sequences have been suppressed. Explain
These RefSeqs were suppressed for the
cited reason(s). Suppressed RefSeqs do not appear in BLAST databases, related
sequence links, or BLAST links (BLink), but may still be retrieved by clicking on
their accession.version below.
-
NM_139028.2: Suppressed sequence
- Description
- NM_139028.2: This RefSeq was permanently suppressed because it is a nonsense-mediated mRNA decay (NMD) candidate.