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    DTD2 D-aminoacyl-tRNA deacylase 2 [ Homo sapiens (human) ]

    Gene ID: 112487, updated on 2-Nov-2024

    Summary

    Official Symbol
    DTD2provided by HGNC
    Official Full Name
    D-aminoacyl-tRNA deacylase 2provided by HGNC
    Primary source
    HGNC:HGNC:20277
    See related
    Ensembl:ENSG00000129480 AllianceGenome:HGNC:20277
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Also known as
    ATD; C14orf126
    Summary
    Enables Ala-tRNA(Thr) hydrolase activity. Involved in aminoacyl-tRNA metabolism involved in translational fidelity. Predicted to be active in cytoplasm. [provided by Alliance of Genome Resources, Nov 2024]
    Expression
    Ubiquitous expression in fat (RPKM 6.7), brain (RPKM 4.9) and 25 other tissues See more
    Orthologs
    NEW
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    Try the new Transcript table

    Genomic context

    See DTD2 in Genome Data Viewer
    Location:
    14q12
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 14 NC_000014.9 (31446036..31457506, complement)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 14 NC_060938.1 (25643623..25655096, complement)
    RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 14 NC_000014.8 (31915242..31926712, complement)

    Chromosome 14 - NC_000014.9Genomic Context describing neighboring genes Neighboring gene HEAT repeat containing 5A Neighboring gene uncharacterized LOC124903438 Neighboring gene ATP synthase membrane subunit c locus 1 pseudogene 2 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 5656 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 8232 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 8233 Neighboring gene HEATR5A divergent transcript Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr14:31925731-31926316 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr14:31926317-31926902 Neighboring gene ribosomal protein L9 pseudogene 4 Neighboring gene G protein-coupled receptor 33

    Genomic regions, transcripts, and products

    Expression

    • Project title: HPA RNA-seq normal tissues HPA RNA-seq normal tissues
    • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
    • BioProject: PRJEB4337
    • Publication: PMID 24309898
    • Analysis date: Wed Apr 4 07:08:55 2018

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Clone Names

    • MGC9912, FLJ51408

    Gene Ontology Provided by GOA

    Function Evidence Code Pubs
    enables Ala-tRNA(Thr) hydrolase activity IDA
    Inferred from Direct Assay
    more info
    PubMed 
    enables D-tyrosyl-tRNA(Tyr) deacylase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    enables tRNA binding IEA
    Inferred from Electronic Annotation
    more info
     
    Process Evidence Code Pubs
    involved_in aminoacyl-tRNA metabolism involved in translational fidelity IDA
    Inferred from Direct Assay
    more info
    PubMed 
    involved_in tRNA metabolic process IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    Component Evidence Code Pubs
    is_active_in cytoplasm IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in cytoplasm NAS
    Non-traceable Author Statement
    more info
    PubMed 

    General protein information

    Preferred Names
    D-aminoacyl-tRNA deacylase 2
    Names
    D-tyrosyl-tRNA deacylase 2 (putative)
    D-tyrosyl-tRNA(Tyr) deacylase 2
    L-alanyl-tRNA deacylase
    animalia-specifc tRNA deacylase
    animalia-specific tRNA deacylase
    probable D-tyrosyl-tRNA(Tyr) deacylase 2
    putative D-tyrosyl-tRNA deacylase 2
    putative D-tyrosyl-tRNA(Tyr) deacylase 2
    NP_542395.1

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_080664.3NP_542395.1  D-aminoacyl-tRNA deacylase 2

      See identical proteins and their annotated locations for NP_542395.1

      Status: VALIDATED

      Source sequence(s)
      AK055367, AL139353, AL163973, BI553940, BU675173
      Consensus CDS
      CCDS9643.1
      UniProtKB/Swiss-Prot
      D3DS87, Q96FN9
      Related
      ENSP00000312224.4, ENST00000310850.9
      Conserved Domains (1) summary
      pfam02580
      Location:11167
      Tyr_Deacylase; D-Tyr-tRNA(Tyr) deacylase

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000014.9 Reference GRCh38.p14 Primary Assembly

      Range
      31446036..31457506 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060938.1 Alternate T2T-CHM13v2.0

      Range
      25643623..25655096 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)