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    EIF2AK3-DT EIF2AK3 divergent transcript [ Homo sapiens (human) ]

    Gene ID: 101928403, updated on 22-Oct-2024

    Summary

    Official Symbol
    EIF2AK3-DTprovided by HGNC
    Official Full Name
    EIF2AK3 divergent transcriptprovided by HGNC
    Primary source
    HGNC:HGNC:54066
    See related
    Ensembl:ENSG00000234028 AllianceGenome:HGNC:54066
    Gene type
    ncRNA
    RefSeq status
    VALIDATED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Expression
    Ubiquitous expression in lymph node (RPKM 1.3), ovary (RPKM 1.0) and 25 other tissues See more
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    Genomic context

    See EIF2AK3-DT in Genome Data Viewer
    Location:
    2p11.2
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 2 NC_000002.12 (88627829..88631825)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 2 NC_060926.1 (88639833..88643829)
    RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 2 NC_000002.11 (88927347..88931343)

    Chromosome 2 - NC_000002.12Genomic Context describing neighboring genes Neighboring gene MED14-independent group 3 enhancer GRCh37_chr2:88837459-88838658 Neighboring gene uncharacterized LOC101928371 Neighboring gene sperm microtubule inner protein 9 Neighboring gene eukaryotic translation initiation factor 2 alpha kinase 3 Neighboring gene P300/CBP strongly-dependent group 1 enhancer GRCh37_chr2:88899203-88900402 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 16168 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 16169 Neighboring gene H3K27ac hESC enhancer GRCh37_chr2:88926077-88926756 Neighboring gene NANOG-H3K27ac hESC enhancer GRCh37_chr2:88926757-88927436 Neighboring gene NANOG-H3K27ac hESC enhancer GRCh37_chr2:88927437-88928116 Neighboring gene uncharacterized LOC102724805 Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr2:88958311-88959220 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 16172 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 11733 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 16173 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 16174 Neighboring gene ReSE screen-validated silencer GRCh37_chr2:88998185-88998359 Neighboring gene uncharacterized LOC105374853 Neighboring gene ribose 5-phosphate isomerase A

    Genomic regions, transcripts, and products

    Expression

    • Project title: HPA RNA-seq normal tissues HPA RNA-seq normal tissues
    • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
    • BioProject: PRJEB4337
    • Publication: PMID 24309898
    • Analysis date: Wed Apr 4 07:08:55 2018

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_135540.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AC062029, BC046476, CA432512
      Related
      ENST00000453008.4

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000002.12 Reference GRCh38.p14 Primary Assembly

      Range
      88627829..88631825
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060926.1 Alternate T2T-CHM13v2.0

      Range
      88639833..88643829
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)