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    LEISA1 lncRNA enhancing IL-6/STAT3 signaling activation 1 [ Homo sapiens (human) ]

    Gene ID: 100126784, updated on 17-Sep-2024

    Summary

    Official Symbol
    LEISA1provided by HGNC
    Official Full Name
    lncRNA enhancing IL-6/STAT3 signaling activation 1provided by HGNC
    Primary source
    HGNC:HGNC:55264
    See related
    AllianceGenome:HGNC:55264
    Gene type
    ncRNA
    RefSeq status
    VALIDATED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Also known as
    LEISA; NAV2-AS6
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    Genomic context

    See LEISA1 in Genome Data Viewer
    Location:
    11p15.1
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 11 NC_000011.10 (19710934..19714672, complement)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 11 NC_060935.1 (19831387..19835125, complement)
    RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 11 NC_000011.9 (19732480..19736218, complement)

    Chromosome 11 - NC_000011.10Genomic Context describing neighboring genes Neighboring gene neuron navigator 2 Neighboring gene small nucleolar RNA SNORA1 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_19823 Neighboring gene microRNA 4486 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 4523 Neighboring gene NANOG-H3K4me1 hESC enhancer GRCh37_chr11:19691725-19692246 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_19830 Neighboring gene ReSE screen-validated silencer GRCh37_chr11:19719279-19719442 Neighboring gene NANOG hESC enhancer GRCh37_chr11:19722632-19723146 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr11:19724554-19725054 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr11:19725055-19725555 Neighboring gene ReSE screen-validated silencer GRCh37_chr11:19734258-19734451 Neighboring gene H3K27ac hESC enhancer GRCh37_chr11:19768963-19769464 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr11:19778561-19779113 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr11:19793703-19794210 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr11:19794211-19794719 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 3201 Neighboring gene microRNA 4694 Neighboring gene H3K27ac hESC enhancer GRCh37_chr11:19842672-19843172 Neighboring gene H3K27ac hESC enhancer GRCh37_chr11:19843173-19843673 Neighboring gene CDK7 strongly-dependent group 2 enhancer GRCh37_chr11:19913575-19914774 Neighboring gene Sharpr-MPRA regulatory region 6685 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 4524 Neighboring gene MED14-independent group 3 enhancer GRCh37_chr11:20000027-20001226 Neighboring gene NAV2 antisense RNA 3

    Genomic regions, transcripts, and products

    General gene information

    Markers

    Other Names

    • NAV2 antisense RNA 6
    • lncRNA enhancing IL-6/STAT3 signaling activation

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_015384.2 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AC009549, BC035903, BC047636, BF439944, DA492854, H83398

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000011.10 Reference GRCh38.p14 Primary Assembly

      Range
      19710934..19714672 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060935.1 Alternate T2T-CHM13v2.0

      Range
      19831387..19835125 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)